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Larsdotter Nilsson, Emma
Publications (7 of 7) Show all publications
Larsdotter Nilsson, E. & Fritzson, P. (2005). A Metabolic Specialization of a General Purpose Modelica Library for Biological and Biochemical Systems. In: : . Paper presented at Modelica2005, the 4th International Modelica Conference,2005.
Open this publication in new window or tab >>A Metabolic Specialization of a General Purpose Modelica Library for Biological and Biochemical Systems
2005 (English)Conference paper, Published paper (Other academic)
National Category
Computer Sciences
Identifiers
urn:nbn:se:liu:diva-23104 (URN)2501 (Local ID)2501 (Archive number)2501 (OAI)
Conference
Modelica2005, the 4th International Modelica Conference,2005
Available from: 2009-10-07 Created: 2009-10-07 Last updated: 2018-01-13
Larsdotter Nilsson, E. & Fritzson, P. (2005). Biochemical and Metabolic Modeling and Simulation with Modelica. In: Peter Fritzson (Ed.), BioMedSim 2005. Proceedings of the Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, May 26-27, 2005, Linköping, Sweden: . Paper presented at 4th International Conference on Modeling and Simulation in Biology, Medicine, and Biomedical Engineering (BioMedSim’2005), Linköping, Sweden, May 26-27 (pp. 115-124).
Open this publication in new window or tab >>Biochemical and Metabolic Modeling and Simulation with Modelica
2005 (English)In: BioMedSim 2005. Proceedings of the Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, May 26-27, 2005, Linköping, Sweden / [ed] Peter Fritzson, 2005, p. 115-124Conference paper, Published paper (Refereed)
Abstract [en]

In the drug industry, the later a substance is discharged from the drug development pipeline, the higher the financial cost. In order to reduce the number of lead compounds a number of computerized systems have been suggested, and in most of these systems modeling and simulation of the lead compound’s effects on different metabolic pathways are essential. Inthese systems, substances that are expected to be harmful or lethal can be removed at an early stage and a reduced number of lead compounds can be chosen for the concluding tests.

Given Modelica’s previous success with modeling and simulation of huge and complex systems it is likely that it will also be suitable for modeling, simulation, and visualization of metabolic pathway systems, e.g. those systems used in the drug industry. A Modelica library designed to be used for modeling, simulation, and visualization of metabolic pathways is the specialpurpose library Metabolic, an extension of the abstract Modelica library BioChem.

Keywords
Pathway modeling, pathway libraries, template models, BioChem, Metabolic.
National Category
Electrical Engineering, Electronic Engineering, Information Engineering
Identifiers
urn:nbn:se:liu:diva-110204 (URN)
Conference
4th International Conference on Modeling and Simulation in Biology, Medicine, and Biomedical Engineering (BioMedSim’2005), Linköping, Sweden, May 26-27
Available from: 2014-09-04 Created: 2014-09-04 Last updated: 2014-10-14Bibliographically approved
Larsdotter Nilsson, E. (2005). Modeling, simulation, and visualization of metabolic pathways using Modelica. (Licentiate dissertation). Linköping: Department of Computer and Information Science, Linköpings universitet
Open this publication in new window or tab >>Modeling, simulation, and visualization of metabolic pathways using Modelica
2005 (English)Licentiate thesis, comprehensive summary (Other academic)
Place, publisher, year, edition, pages
Linköping: Department of Computer and Information Science, Linköpings universitet, 2005. p. 77
Series
Linköping Studies in Science and Technology. Thesis, ISSN 0280-7971 ; 1166
Identifiers
urn:nbn:se:liu:diva-166391 (URN)LiU-TEK-LIC-2005:21 (Local ID)9185299553 (ISBN)LiU-TEK-LIC-2005:21 (Archive number)LiU-TEK-LIC-2005:21 (OAI)
Note

Licentiatavhandling Linköping : Linköpings universitet, 2005

Available from: 2020-06-12 Created: 2020-06-12 Last updated: 2023-02-21Bibliographically approved
Larsdotter Nilsson, E. & Fritzson, P. (2003). BioChem - A Biological and Chemical Library for Modelica. In: Proceedings of the 3rd International Modelica Conference (November 3-4, Linköping, Sweden). Modelica Assocation
Open this publication in new window or tab >>BioChem - A Biological and Chemical Library for Modelica
2003 (English)In: Proceedings of the 3rd International Modelica Conference (November 3-4, Linköping, Sweden), Modelica Assocation , 2003Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
Modelica Assocation, 2003
National Category
Engineering and Technology
Identifiers
urn:nbn:se:liu:diva-62139 (URN)
Available from: 2010-11-19 Created: 2010-11-19 Last updated: 2014-10-08
Larsdotter Nilsson, E. & Fritzson, P. (2003). Simulating Willow Productivity Using Modelica. In: : . Paper presented at Proc. of 3rd Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, Lebanon, 27-30 May 2003.
Open this publication in new window or tab >>Simulating Willow Productivity Using Modelica
2003 (English)Conference paper, Published paper (Refereed)
Keywords
growth model, short-rotation, coppice system, object oriented modeling, multi-domain, Modelica, discrete systems, continuous systems, hybrid systems
National Category
Computer Sciences
Identifiers
urn:nbn:se:liu:diva-62113 (URN)
Conference
Proc. of 3rd Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, Lebanon, 27-30 May 2003
Available from: 2010-11-19 Created: 2010-11-19 Last updated: 2018-01-12
Larsdotter Nilsson, E. (2003). Simulation of Cellular Pathways Using Modelica. In: Swedish Bioinformatics Workshop for Ph D Students and Postdocs, Liköping, Sweden 24-25 October.
Open this publication in new window or tab >>Simulation of Cellular Pathways Using Modelica
2003 (English)In: Swedish Bioinformatics Workshop for Ph D Students and Postdocs, Liköping, Sweden 24-25 October, 2003Conference paper, Published paper (Refereed)
National Category
Engineering and Technology
Identifiers
urn:nbn:se:liu:diva-62124 (URN)
Available from: 2010-11-19 Created: 2010-11-19 Last updated: 2010-11-22
Larsdotter Nilsson, E. & Fritzson, P. (2003). Using Modelica for Modeling of Discrete, Continuous and Hybrid Biological and Biochemical Systems. In: : . Paper presented at Proc. of 3rd Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, Lebanon, 27-30 May 2003.
Open this publication in new window or tab >>Using Modelica for Modeling of Discrete, Continuous and Hybrid Biological and Biochemical Systems
2003 (English)Conference paper, Published paper (Refereed)
National Category
Engineering and Technology
Identifiers
urn:nbn:se:liu:diva-62128 (URN)
Conference
Proc. of 3rd Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, Lebanon, 27-30 May 2003
Available from: 2010-11-19 Created: 2010-11-19 Last updated: 2014-10-08
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