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Multivariate monitoring, modelling and control for stabilization of bioprocesses
Linköping University, Department of Physics, Measurement Technology, Biology and Chemistry. Linköping University, The Institute of Technology.
2002 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

The obstacles to overcome low reproducibility and stability of bioprocesses are numerous. Underlying biochemical processes are inherently non-linear, complex and subject to shifting initial conditions. Problems with high variability are also associated to production strains and scale-up of a bioprocess to largescale bioreactors. Reliable on-line monitoring of key process variables is still a challenging task and hinders the closed-loop control of these key process variables. In this thesis, methods for stabilization of bioprocesses by means of multivariate on-line monitoring, modelling and control are studied.

The foundation was laid with the development of integrated multivariate bioprocess monitoring, modelling and control within a real-time knowledge-based expert system. Thereby, a large number of signals from different advanced on-line analyzers ranging from mass spectroscopy via on-line HPLC to nearinfrared spectroscopy and electronic noses, could be used in combination with a variety of multivariate modelling and control tools for a flexible development of methods for stabilization of bioreactor processes. Subsequently, it could be shown how problems related to the initial conditions of a bioprocess can be solved by a multivariate assessment of the preculture quality. Furthermore, it was demonstrated how qualitative and quantitative key process variables can be made available and applied for process supervision; here, multivariate statistical process modelling and neural network sensor fusion from on-line monitoring of bioprocesses with advanced on-line analyzers were used. Finally, a closed-loop control method was presented, showing how feedback control of a multivariate key process variable trajectory can improve adherence to the specifications of the bioprocess. As model systems, aerobic fed-batch cultivations using recombinant Escherichia coli and anaerobic yoghurt batch fermentations have been used. The results provide general methods for multivariate stabilization of bioprocesses in precultivation steps, laboratory-scale and production-scale. They show that multivariate monitoring, modelling and control can provide a functional and versatile framework for reduced batch-tobatch variation and stabilization of bioprocesses with possible implications on product quality and process economics.

Place, publisher, year, edition, pages
Linköping: Linköping University , 2002. , p. 57
Series
Linköping Studies in Science and Technology. Dissertations, ISSN 0345-7524 ; 788
National Category
Control Engineering
Identifiers
URN: urn:nbn:se:liu:diva-179550Libris ID: 8804174ISBN: 9173734721 (print)OAI: oai:DiVA.org:liu-179550DiVA, id: diva2:1597040
Public defence
2002-12-12, hörsal Key 1, K-huset, Linköpings universitet, Linköping, 13:30
Opponent
Available from: 2021-09-24 Created: 2021-09-24 Last updated: 2023-03-07Bibliographically approved
List of papers
1. Integration of distributed multi-analyzer monitoring and control in bioprocessing based on a real-time expert system
Open this publication in new window or tab >>Integration of distributed multi-analyzer monitoring and control in bioprocessing based on a real-time expert system
2003 (English)In: Journal of Biotechnology, ISSN 0168-1656, E-ISSN 1873-4863, Vol. 103, no 3, p. 237-248Article in journal (Refereed) Published
Abstract [en]

A computer system solution for integration of a distributed bioreactor monitoring and control instrumentation on the laboratory scale is described. Bioreactors equipped with on-line analyzers for mass spectrometry, near-infrared spectroscopy, electrochemical probes and multi-array gas sensors and their respective software were networked through a real-time expert systems platform. The system allowed data transmission of more than 1800 different signals from the instrumentation, including signals from gas sensors, electrodes, spectrometer detectors, balances, flowmeters, etc., and were used for processing and carrying out a number of computational tasks such as partial least-square regression, principal component analysis, artificial neural network modelling, heuristic decision-making and adaptive control. The system was demonstrated on different cultivations/fermentations which illustrated sensor fusion control, multivariate statistical process monitoring, adaptive glucose control and adaptive multivariate control. The performance of these examples showed high operational stability and reliable function and meet typical requirements for production safety and quality. © 2003 Elsevier B.V. All rights reserved.

Keywords
Bioreactor monitoring, Fermentation control, Knowledge-based expert system, Multi-analyzers
National Category
Engineering and Technology
Identifiers
urn:nbn:se:liu:diva-46519 (URN)10.1016/S0168-1656(03)00121-4 (DOI)
Available from: 2009-10-11 Created: 2009-10-11 Last updated: 2021-09-24
2. Assessment of the performance of a fed-batch cultivation from the preculture quality using an electronic nose
Open this publication in new window or tab >>Assessment of the performance of a fed-batch cultivation from the preculture quality using an electronic nose
2002 (English)In: Biotechnology progress (Print), ISSN 8756-7938, E-ISSN 1520-6033, Vol. 18, no 2, p. 380-386Article in journal (Refereed) Published
Abstract [en]

An electronic nose, a gas-phase multisensor system, was used to monitor precultivations of a recombinant tryptophan-producing Escherichia coli strain. The electronic nose signals showed a high correlation toward the main stages of the precultivations, namely, exponential growth, oxygen-limited growth, and glucose depletion. Principal component analysis (PCA) of the electronic nose signals was performed and shown to be useful for monitoring preculture progression. More importantly, PCA also allowed a qualitative assessment of the preculture performance during subsequent fed-batch cultivations. The electronic nose signals from the precultures showed, furthermore, a high correlation to the time of phosphate limitation and the tryptophan yield coefficient of the subsequent fed-batch cultivations, which allowed an accurate prediction of these process variables using partial least squares (PLS). The results demonstrate on data from 12 cultivations how the electronic nose can be a useful tool for the assessment of inoculum quality, thereby providing means of reducing batch-to-batch variation and increasing the productivity of bioprocesses.

National Category
Natural Sciences
Identifiers
urn:nbn:se:liu:diva-44243 (URN)10.1021/bp010166j (DOI)76106 (Local ID)76106 (Archive number)76106 (OAI)
Available from: 2009-10-10 Created: 2009-10-10 Last updated: 2021-09-24
3. Sensor fusion for on-line monitoring of yoghurt fermentation
Open this publication in new window or tab >>Sensor fusion for on-line monitoring of yoghurt fermentation
2002 (English)In: Journal of Biotechnology, ISSN 0168-1656, E-ISSN 1873-4863, Vol. 99, no 3, p. 237-248Article in journal (Refereed) Published
Abstract [en]

Measurement data from an electronic nose (EN), a near-infrared spectrometer (NIRS) and standard bioreactor probes were used to follow the course of lab-scale yoghurt fermentation. The sensor signals were fused using a cascade neural network: a primary network predicted quantitative process variables, including lactose, galactose and lactate, a secondary network predicted a qualitative process state variable describing critical process phases, such as the onset of coagulation or the harvest time. Although the accuracy of the neural network prediction was acceptable and comparable with the off-line reference assay, its stability and performance were significantly improved by correction of faulty data. The results demonstrate that on-line sensor fusion with the chosen analyzers improves monitoring and quality control of yoghurt fermentation with implications to other fermentation processes. ⌐ 2002 Elsevier Science B.V. All rights reserved.

National Category
Natural Sciences
Identifiers
urn:nbn:se:liu:diva-44254 (URN)10.1016/S0168-1656(02)00213-4 (DOI)76123 (Local ID)76123 (Archive number)76123 (OAI)
Available from: 2009-10-10 Created: 2009-10-10 Last updated: 2021-09-24
4. Online monitoring of a bioprocess based on a multi-analyser system and multivariate statistical process modelling
Open this publication in new window or tab >>Online monitoring of a bioprocess based on a multi-analyser system and multivariate statistical process modelling
2002 (English)In: Journal of chemical technology and biotechnology (1986), ISSN 0268-2575, E-ISSN 1097-4660, Vol. 77, no 10, p. 1157-1168Article in journal (Refereed) Published
Abstract [en]

Multivariate statistical process control (MSPC) was for the first time applied to analyse data from a bioprocess on-line multi-analyser system consisting of an electronic nose (EN), a near-infrared spectroscope (NIRS), a mass spectrometer (MS) and standard bioreactor probes. One hundred and fifty sensor signals from the electronic nose, 1050 wavelength signals from the NIRS, carbon dioxide evolution rate calculated from mass spectrometer signals and standard bioreactor data (eg amount of substrate fed) were interrogated for their ability to model a bioprocess using MSPC. The models obtained were validated on a recombinant Escherichia coli fed-batch process for tryptophan production. Limiting trajectories were defined in the MSPC models for warning, action, and process experience with respect to biomass and tryptophan concentrations. The results showed the capacity and robustness of MSPC models for monitoring with multi-analysers and allowed a comparison of the different analysers' suitability for this kind of data processing. Furthermore, the results demonstrate that MSPC models provide a functional and versatile framework for coping with large information flows and are also suited to a variety of other bioprocessing monitoring and control tasks. ⌐ 2002 Society of Chemical Industry.

National Category
Natural Sciences
Identifiers
urn:nbn:se:liu:diva-44253 (URN)10.1002/jctb.691 (DOI)76120 (Local ID)76120 (Archive number)76120 (OAI)
Available from: 2009-10-10 Created: 2009-10-10 Last updated: 2021-09-24
5. Bioprocess control from a multivariate process trajectory.
Open this publication in new window or tab >>Bioprocess control from a multivariate process trajectory.
2004 (English)In: Bioprocess and biosystems engineering (Print), ISSN 1615-7591, E-ISSN 1615-7605, Vol. 26, no 6, p. 401-411Article in journal (Refereed) Published
Abstract [en]

A multivariate bioprocess control approach, capable of tracking a pre-set process trajectory correlated to the biomass or product concentration in the bioprocess is described. The trajectory was either a latent variable derived from multivariate statistical process monitoring (MSPC) based on partial least squares (PLS) modeling, or the absolute value of the process variable. In the control algorithm the substrate feed pump rate was calculated from on-line analyzer data. The only parameters needed were the substrate feed concentration and the substrate yield of the growth-limiting substrate. On-line near-infrared spectroscopy data were used to demonstrate the performance of the control algorithm on an Escherichia coli fed-batch cultivation for tryptophan production. The controller showed good ability to track a defined biomass trajectory during varying process dynamics. The robustness of the control was high, despite significant external disturbances on the cultivation and control parameters.

National Category
Natural Sciences
Identifiers
urn:nbn:se:liu:diva-40927 (URN)10.1007/s00449-003-0327-z (DOI)54656 (Local ID)54656 (Archive number)54656 (OAI)
Available from: 2009-10-10 Created: 2009-10-10 Last updated: 2023-11-02

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