liu.seSearch for publications in DiVA
Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • harvard1
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • oxford
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
A Priori Contact Preferences in Molecular Recognition
Department of Biochemistry and Pharmacy Åbo Akademi University.
Department of Mathematics and statistics University of Helsinki.
Linköping University, The Institute of Technology. Linköping University, Department of Mathematics, Mathematical Statistics .
Departmetn of Biochemistry and Pharmacy Åbo Akademi University.
2005 (English)In: Journal of Bioinformatics and Computational Biology, ISSN 0219-7200, Vol. 3, no 4, 861-890 p.Article in journal (Refereed) Published
Abstract [en]

A molecular interaction library modeling favorable non-bonded interactions between atoms and molecular fragments is considered. In this paper, we represent the structure of the interaction library by a network diagram, which demonstrates that the underlying prediction model obtained for a molecular fragment is multi-layered. We clustered the molecular fragments into four groups by analyzing the pairwise distances between the molecular fragments. The distances are represented as an unrooted tree, in which the molecular fragments fall into four groups according to their function. For each fragment group, we modeled a group-specific a priori distribution with a Dirichlet distribution.

Place, publisher, year, edition, pages
2005. Vol. 3, no 4, 861-890 p.
Keyword [en]
molecular interactions, personal probabilities
National Category
Mathematics
Identifiers
URN: urn:nbn:se:liu:diva-28826DOI: 10.1142/S0219720005001417Local ID: 14016OAI: oai:DiVA.org:liu-28826DiVA: diva2:249638
Available from: 2009-10-09 Created: 2009-10-09 Last updated: 2011-01-12

Open Access in DiVA

No full text

Other links

Publisher's full texthttp://www.worldscinet.com/jbcb/03/0304/S02197200050304.html

Authority records BETA

Koski, Timo

Search in DiVA

By author/editor
Koski, Timo
By organisation
The Institute of TechnologyMathematical Statistics
In the same journal
Journal of Bioinformatics and Computational Biology
Mathematics

Search outside of DiVA

GoogleGoogle Scholar

doi
urn-nbn

Altmetric score

doi
urn-nbn
Total: 354 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • harvard1
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • oxford
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf