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Modeling for simulation and data storage of cellular pathways: Similarities and differences
Linköping University, Department of Computer and Information Science, Database and information techniques. Linköping University, The Institute of Technology.
Linköping University, Department of Computer and Information Science, Database and information techniques. Linköping University, The Institute of Technology. (IDA/ADIT)ORCID iD: 0000-0002-9084-0470
2005 (English)In: Proceedings of the Fourth Modeling and Simulation in Biology, Medicine and Biomedical Engineering Conference - BioMedSim,2005, 2005, 65- p.Conference paper, Published paper (Refereed)
Abstract [en]

The amount of information about molecular interactions and cellular pathways is rapidly increasing as experiments in the area are generating new information. To use this large amount of data in an optimal way there is a need for providing standardized descriptions of data. In the future it would also be of high importance to use standardized data descriptions capable of representing results originating from experiments as well as data used for advanced analyses and simulations, to allow for an optimal comparison and reuse of information in various situations. In this paper we compare three XML-based standards provided for exchange of molecular interaction and pathway data with the information provided in BioChem a library for simulation.

Place, publisher, year, edition, pages
2005. 65- p.
National Category
Computer Science
Identifiers
URN: urn:nbn:se:liu:diva-28854Local ID: 14046OAI: oai:DiVA.org:liu-28854DiVA: diva2:249666
Conference
Fourth Modeling and Simulation in Biology, Medicine and Biomedical Engineering Conference - BioMedSim,2005
Available from: 2009-10-09 Created: 2009-10-09 Last updated: 2015-02-18

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Strömbäck, LenaLambrix, Patrick

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