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Evaluation of ontology development tools for bioinformatics
Linköping University, Department of Computer and Information Science, Database and information techniques. Linköping University, The Institute of Technology. (IDA/ADIT)ORCID iD: 0000-0002-9084-0470
Linköping University, Department of Computer and Information Science, Database and information techniques. Linköping University, The Institute of Technology.
Linköping University, Department of Computer and Information Science, Database and information techniques. Linköping University, The Institute of Technology.
2005 (English)In: Yearbook of the International Medical Informatics Association 2005 / [ed] Haux R, Kulikowski C, Stuttgart: Schattauer Verlagsgesellschaft mbH , 2005, 547-554 p.Chapter in book (Refereed)
Abstract [en]

Ontologies are being used nowadays in many areas, including bioinformatics. To assist users in developing and maintaining ontologies a number of tools have been developed. In this paper we compare four such tools, Protégé-2000, Chimaera, DAG-Edit and OilEd. As test ontologies we have used ontologies from the Gene Ontology Consortium. No system is preferred in all situations, but each system has its own strengths and weaknesses.

Place, publisher, year, edition, pages
Stuttgart: Schattauer Verlagsgesellschaft mbH , 2005. 547-554 p.
National Category
Computer Science
Identifiers
URN: urn:nbn:se:liu:diva-30569Local ID: 16160OAI: oai:DiVA.org:liu-30569DiVA: diva2:251392
Note

This is a best paper selection and re-publication of an article previously published in Bioinformatics, 19:1564-1571, 2003.

Available from: 2009-10-09 Created: 2009-10-09 Last updated: 2015-02-18Bibliographically approved

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http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.130.9261

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Lambrix, Patrick

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  • nn-NB
  • sv-SE
  • Other locale
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Output format
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