Biochemical Mathematical Modeling with Modelica and the BioChem Library
2007 (English)Conference paper (Refereed)
Considering the large amounts of data that is nowadays produced in the biochemistry (functional genomics) it is difficult to extract the information from the measurements. There is currently also a great interest in the development of novel analytical technologies for rapid screening of disease symptoms in pharmaceutical and clinical ap-plications. Modeling and simulation can provide a useful help in understanding the rela-tions of the measured substances and to minimize the need for measurements. The Bio-Chem library presented here is the first free Modelica library available for mathematical modeling of biochemical processes. Three examples are shown to illustrate the library. First, a simple insulin model is presented. Then a simplified model of cholesterol to-gether with simulations are shown. Next, a simple drug model together with parameter estimation in NONMEN are presented. The BioChem library allows for fast and end-user friendly modeling of biomedical systems. The graphical user interface provides graphics similar to that used in the description of metabolic pathways in biochemistry.
Place, publisher, year, edition, pages
cholesterol metabolic pathways, feedback control, functional ge
National CategoryComputer Science
IdentifiersURN: urn:nbn:se:liu:diva-36983Local ID: 33194OAI: oai:DiVA.org:liu-36983DiVA: diva2:257832