For autonomous systems such as unmanned aerial vehicles to successfully perform complex missions, a great deal of embedded reasoning is required at varying levels of abstraction. In order to make use of diverse reasoning modules in such systems, issues of integration such as sensor data flow and information flow between such modules has to be taken into account. The DyKnow framework is a tool with a formal basis that pragmatically deals with many of the architectural issues which arise in such systems. This includes a systematic stream-based method for handling the sense-reasoning gap, caused by the wide difference in abstraction levels between the noisy data generally available from sensors and the symbolic, semantically meaningful information required by many high-level reasoning modules. DyKnow has proven to be quite robust and widely applicable to different aspects of hybrid software architectures for robotics.In this paper, we describe the DyKnow framework and show how it is integrated and used in unmanned aerial vehicle systems developed in our group. In particular, we focus on issues pertaining to the sense-reasoning gap and the symbol grounding problem and the use of DyKnow as a means of generating semantic structures representing situational awareness for such systems. We also discuss the use of DyKnow in the context of automated planning, in particular execution monitoring.