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On the formation of cyclobutane pyrimidine dimers in UV-irradiated DNA: why are thymines more reactive?
Uppsala University, Sweden.
Uppsala University, Sweden.
2003 (English)In: Photochemistry and Photobiology, ISSN 0031-8655, E-ISSN 1751-1097, Vol. 78, no 2, 159-167 p.Article in journal (Refereed) Published
Abstract [en]

The reaction pathways for thermal and photochemical formation of cyclobutane pyrimidine dimers in DNA are explored using density functional theory techniques. Although it is found that the thermal [2+2] cycloadditions of thymine + thymine (T + T  T<>T), cytosine +  cytosine (C + C  C<>C) and cytosine + thymine (C + T  C<>T) all are similarly unfavorable in terms of energy barriers and reaction energies, the excited-state energy curves associated with the corresponding photochemical cycloadditions display differences that – in line with experimental findings – unanimously point to the predominance of T<>T in UV-irradiated DNA. It is shown that the photocycloaddition of thymines is facilitated by the fact that the S1 state of the corresponding reactant complex lies comparatively high in energy. Moreover, at a nuclear configuration coinciding with the ground-state transition structure, the excited-state energy curve displays an absolute minimum only for the T + T system. Finally, the T + T system is also associated with the most favorable excited-state energy barriers and has the smallest S2–S0 energy gap at the ground-state transition structure.

Place, publisher, year, edition, pages
John Wiley & Sons, 2003. Vol. 78, no 2, 159-167 p.
National Category
Natural Sciences
URN: urn:nbn:se:liu:diva-96780DOI: 10.1562/0031-8655(2003)0780159OTFOCP2.0.CO2OAI: diva2:643329
Available from: 2013-08-27 Created: 2013-08-27 Last updated: 2013-09-04Bibliographically approved

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Durbeej, Bo
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