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  • 1. Order onlineBuy this publication >>
    Majedy, Motasam
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Evaluation of a melanoma screening framework based on depth resolved light scattering2023Licentiate thesis, comprehensive summary (Other academic)
    Abstract [en]

    Melanoma is one of the most aggressive types of skin cancer. When detected at an early-stage treatment is usually successful, however, outcomes are often poor when the disease is detected at an advanced stage. There has been considerable progress in our understanding of the molecular biology, genetics, and immunology of melanoma over the past decade. This has been accompanied by rapid advances in therapeutic strategies for patients with melanoma and an overall improvement in survival rates. However, in spite of these successes, new techniques, and strategies to facilitate early detection, and thus improvements of patient’s outcome is needed as mortality remains high. The work in this thesis aims to utilize a novel noninvasive spatial frequency domain spectroscopy (SFDS) based imaging approach to facilitate early detection on melanoma. 

    List of papers
    1. Evaluation of Tabulated Hemoglobin Absorption Spectra Using Collimated Transmission on Oxygenated Human Lysed Blood
    Open this publication in new window or tab >>Evaluation of Tabulated Hemoglobin Absorption Spectra Using Collimated Transmission on Oxygenated Human Lysed Blood
    2021 (English)In: DIFFUSE OPTICAL SPECTROSCOPY AND IMAGING VIII, SPIE-INT SOC OPTICAL ENGINEERING , 2021, Vol. 11920, article id 119200EConference paper, Published paper (Refereed)
    Abstract [en]

    Absorption coefficient of oxygenated human lysed blood is evaluated with collimated transmission (SCT) to predict blood oxygen saturation using tabulated hemoglobin absorption spectra. We report on discrepancies in expected and observed oxygen levels.

    Place, publisher, year, edition, pages
    SPIE-INT SOC OPTICAL ENGINEERING, 2021
    Series
    Proceedings of SPIE, ISSN 0277-786X
    National Category
    Anesthesiology and Intensive Care
    Identifiers
    urn:nbn:se:liu:diva-185431 (URN)10.1117/12.2615218 (DOI)000797273400013 ()9781510647077 (ISBN)9781510647060 (ISBN)
    Conference
    European Conferences on Biomedical Optics - Diffuse Optical Spectroscopy and Imaging VIII, ELECTR NETWORK, jun 20-25, 2021
    Available from: 2022-06-03 Created: 2022-06-03 Last updated: 2023-02-22
    2. Spectral characterization of liquid hemoglobin phantoms with varying oxygenation states
    Open this publication in new window or tab >>Spectral characterization of liquid hemoglobin phantoms with varying oxygenation states
    Show others...
    2022 (English)In: Journal of Biomedical Optics, ISSN 1083-3668, E-ISSN 1560-2281, Vol. 27, no 7, article id 74708Article in journal (Refereed) Published
    Abstract [en]

    Significance: For optical methods to accurately assess hemoglobin oxygen saturation in vivo, an independently verifiable tissue-like standard is required for validation. For this purpose, we propose three hemoglobin preparations and evaluate methods to characterize them.

    Aim: To spectrally characterize three different hemoglobin preparations using multiple spectroscopic methods and to compare their absorption spectra to commonly used reference spectra.

    Approach: Absorption spectra of three hemoglobin preparations in solution were characterized using spectroscopic collimated transmission: whole blood, lysed blood, and ferrous-stabilized hemoglobin. Tissue-mimicking phantoms composed of Intralipid, and the hemoglobin solutions were characterized using spatial frequency-domain spectroscopy (SFDS) and enhanced perfusion and oxygen saturation (EPOS) techniques while using yeast to deplete oxygen.

    Results: All hemoglobin preparations exhibited similar absorption spectra when accounting for methemoglobin and scattering in their oxyhemoglobin and deoxyhemoglobin forms, respectively. However, systematic differences were observed in the fitting depending on the reference spectra used. For the tissue-mimicking phantoms, SFDS measurements at the surface of the phantom were affected by oxygen diffusion at the interface with air, associated with higher values than for the EPOS system.

    Conclusions: We show the validity of different blood phantoms and what considerations need to be addressed in each case to utilize them equivalently.

    Place, publisher, year, edition, pages
    Bellingham, WA, United States: SPIE - International Society for Optical Engineering, 2022
    Keywords
    hemoglobin; oxygen saturation; tissue simulating phantom
    National Category
    Medical Laboratory and Measurements Technologies Atom and Molecular Physics and Optics
    Identifiers
    urn:nbn:se:liu:diva-183172 (URN)10.1117/1.jbo.27.7.074708 (DOI)000832962900012 ()34850613 (PubMedID)2-s2.0-85122425205 (Scopus ID)
    Note

    Funding: VINNOVA grants [2016-02211, 2017-01435, 2019-01522]; Alice Wallenberg Foundations Center for Molecular Medicine at Linkoping University (WCMM)

    Available from: 2022-02-24 Created: 2022-02-24 Last updated: 2023-02-22Bibliographically approved
    3. Influence of optical aberrations on depth-specific spatial frequency domain techniques
    Open this publication in new window or tab >>Influence of optical aberrations on depth-specific spatial frequency domain techniques
    2022 (English)In: Journal of Biomedical Optics, ISSN 1083-3668, E-ISSN 1560-2281, Vol. 27, no 11Article in journal (Refereed) Published
    Abstract [en]

    Significance Spatial frequency domain imaging (SFDI) and spatial frequency domain spectroscopy (SFDS) are emerging tools to non-invasively assess tissues. However, the presence of aberrations can complicate processing and interpretation.

    Aim This study develops a method to characterize optical aberrations when performing SFDI/S measurements. Additionally, we propose a post-processing method to compensate for these aberrations and recover arbitrary subsurface optical properties.

    Approach Using a custom SFDS system, we extract absorption and scattering coefficients from a reference phantom at 0 to 15 mm distances from the ideal focus. In post-processing, we characterize aberrations in terms of errors in absorption and scattering relative to the expected in-focus values. We subsequently evaluate a compensation approach in multi-distance measurements of phantoms with different optical properties and in multi-layer phantom constructs to mimic subsurface targets.

    Results Characterizing depth-specific aberrations revealed a strong power law such as wavelength dependence from ∼40 to ∼10 % error in both scattering and absorption. When applying the compensation method, scattering remained within 1.3% (root-mean-square) of the ideal values, independent of depth or top layer thickness, and absorption remained within 3.8%.

    Conclusions We have developed a protocol that allows for instrument-specific characterization and compensation for the effects of defocus and chromatic aberrations on spatial frequency domain measurements.

    Place, publisher, year, edition, pages
    SPIE-SOC PHOTO-OPTICAL INSTRUMENTATION ENGINEERS, 2022
    Keywords
    Absorption, Scattering, Optical properties, Optical aberrations, Tissues, Spatial frequency domain imaging, Light scattering, Optical design
    National Category
    Biomedical Laboratory Science/Technology Atom and Molecular Physics and Optics
    Identifiers
    urn:nbn:se:liu:diva-191892 (URN)10.1117/1.jbo.27.11.116003 (DOI)000933613300006 ()36358008 (PubMedID)
    Note

    Funding: Knut and Alice Wallenberg Foundations Center for Molecular Medicine at Linkoeping University (WCMM)

    Available from: 2023-02-21 Created: 2023-02-21 Last updated: 2023-03-17Bibliographically approved
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  • 2.
    Majedy, Motasam
    et al.
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Das, Nandan K.
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Johansson, Johannes
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Saager, Rolf B.
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Influence of optical aberrations on depth-specific spatial frequency domain techniques2022In: Journal of Biomedical Optics, ISSN 1083-3668, E-ISSN 1560-2281, Vol. 27, no 11Article in journal (Refereed)
    Abstract [en]

    Significance Spatial frequency domain imaging (SFDI) and spatial frequency domain spectroscopy (SFDS) are emerging tools to non-invasively assess tissues. However, the presence of aberrations can complicate processing and interpretation.

    Aim This study develops a method to characterize optical aberrations when performing SFDI/S measurements. Additionally, we propose a post-processing method to compensate for these aberrations and recover arbitrary subsurface optical properties.

    Approach Using a custom SFDS system, we extract absorption and scattering coefficients from a reference phantom at 0 to 15 mm distances from the ideal focus. In post-processing, we characterize aberrations in terms of errors in absorption and scattering relative to the expected in-focus values. We subsequently evaluate a compensation approach in multi-distance measurements of phantoms with different optical properties and in multi-layer phantom constructs to mimic subsurface targets.

    Results Characterizing depth-specific aberrations revealed a strong power law such as wavelength dependence from ∼40 to ∼10 % error in both scattering and absorption. When applying the compensation method, scattering remained within 1.3% (root-mean-square) of the ideal values, independent of depth or top layer thickness, and absorption remained within 3.8%.

    Conclusions We have developed a protocol that allows for instrument-specific characterization and compensation for the effects of defocus and chromatic aberrations on spatial frequency domain measurements.

    Download full text (pdf)
    fulltext
  • 3.
    Majedy, Motasam
    et al.
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Larsson, Marcus
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Salerud, Göran
    Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering. Linköping University, Faculty of Science & Engineering.
    Evaluation of Tabulated Hemoglobin Absorption Spectra Using Collimated Transmission on Oxygenated Human Lysed Blood2021In: DIFFUSE OPTICAL SPECTROSCOPY AND IMAGING VIII, SPIE-INT SOC OPTICAL ENGINEERING , 2021, Vol. 11920, article id 119200EConference paper (Refereed)
    Abstract [en]

    Absorption coefficient of oxygenated human lysed blood is evaluated with collimated transmission (SCT) to predict blood oxygen saturation using tabulated hemoglobin absorption spectra. We report on discrepancies in expected and observed oxygen levels.

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