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Johansson, Anders
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Publications (3 of 3) Show all publications
Monstein, H.-J., Tärnberg, M., Persis, S. & Johansson, A. G. (2014). Comparison of a capillary gel electrophoresis-based multiplex PCR assay and ribosomal intergenic transcribed spacer-2 amplicon sequencing for identification of clinically important Candida species. Journal of Microbiological Methods, 96, 81-83
Open this publication in new window or tab >>Comparison of a capillary gel electrophoresis-based multiplex PCR assay and ribosomal intergenic transcribed spacer-2 amplicon sequencing for identification of clinically important Candida species
2014 (English)In: Journal of Microbiological Methods, ISSN 0167-7012, E-ISSN 1872-8359, Vol. 96, p. 81-83Article in journal (Refereed) Published
Abstract [en]

The performance of a commercially available Seegene Seeplex STI Master Panel 3 multiplex PCR for Candida species identification was compared with an internal transcribed spacer 2 (ITS2) PCR assay. We found that the Seeplex assay was specific for identification of C. albicans, C. krusei, C. parapsilosis, C. glabrata, C. tropicalis and C. dubliniensis.

National Category
Medical and Health Sciences
Identifiers
urn:nbn:se:liu:diva-102441 (URN)10.1016/j.mimet.2013.11.004 (DOI)000329771000015 ()24252582 (PubMedID)
Available from: 2014-01-10 Created: 2013-12-10 Last updated: 2017-12-06
Innings, Å., Ullberg, M., Johansson, A., Rubin, C. J., Noreus, N., Isaksson, M. & Herrman, B. (2007). Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood. Journal of Clinical Microbiology, 45(3), 874-880
Open this publication in new window or tab >>Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood
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2007 (English)In: Journal of Clinical Microbiology, ISSN 0095-1137, E-ISSN 1098-660X, Vol. 45, no 3, p. 874-880Article in journal (Refereed) Published
Abstract [en]

We have developed a single-tube multiplex real-time PCR method for the detection of the eight most common Candida species causing septicemia: Candida albicans, C. dubliniensis, C. famata, C. glabrata, C. guilliermondii, C. krusei, C. parapsilosis, and C. tropicalis. The method developed targets the RNase P RNA gene RPR1. Sequences of this geiie were determined for seven of the Candida species and showed surprisiRgly large sequence variation. C. glabrata was found to have a gene that was five times longer gene than those of the other species, and the nucleotide sequence similarity between C. krusei and C. albicans was as low as 55%. The multiplex PCR contained three probes that enabled the specific detection of C. albicans, C. glabrata, and C. krusei and a fourth probe that allowed the general detection of the remaining species. The method was able to detect 1 to 10 genome copies when the detection limit was tested repeatedly for the four species C. albicans, C. glabrata, C. krusei, and C. guilliermondii. No significant difference in the detection limit was seen when the multiplex format was compared with single-species PCR, i.e., two primers and one probe. The method detected eight clinically relevant Candida species and did not react with other tested non-Candida species or human DNA. The assay was applied to 20 blood samples from nine patients and showed a sensitivity similar to that of culture. Copyright © 2007, American Society for Microbiology. All Rights Reserved.

National Category
Medical and Health Sciences
Identifiers
urn:nbn:se:liu:diva-38149 (URN)10.1128/JCM.01556-06 (DOI)42045 (Local ID)42045 (Archive number)42045 (OAI)
Available from: 2009-10-10 Created: 2009-10-10 Last updated: 2017-12-13
Nilsson, L., Johansson, A. & Kalman, S. (2005). Respiration can be monitored by photoplethysmography with high sensitivity and specificity regardless of anaesthesia and ventilatory mode. Acta Anaesthesiologica Scandinavica, 49(8), 1157-1162
Open this publication in new window or tab >>Respiration can be monitored by photoplethysmography with high sensitivity and specificity regardless of anaesthesia and ventilatory mode
2005 (English)In: Acta Anaesthesiologica Scandinavica, ISSN 0001-5172, E-ISSN 1399-6576, Vol. 49, no 8, p. 1157-1162Article in journal (Refereed) Published
Abstract [en]

Background:  Photoplethysmography (PPG) is a non-invasive optical technique used, for instance, in pulse oximetry. Beside the pulse synchronous component, PPG has a respiratory synchronous variation (PPGr). Efforts have been made to utilize this component for indirect monitoring of respiratory rate and volume. Assessment of the clinical usefulness as well as of the physiological background of PPGr is required. We evaluated if anaesthesia and positive-pressure ventilation would affect PPGr.

Methods:  We recorded reflection mode PPGr, at the forearm, and the respiratory synchronous changes in central venous pressure (CVP), peripheral venous pressure (PVP) and arterial blood pressure (ABP) in 12 patients. Recordings for each patient were made on three occasions: awake with spontaneous breathing; anaesthetized with spontaneous breathing; and anaesthetized with positive-pressure ventilation. We analyzed the sensitivity, specificity, coherence and time relationship between the signals.

Results:  PPGr sensitivity for breath detection was [mean (SD)] >86(21)% and specificity >96(12)%. Respiratory detection in the macrocirculation (CVP, PVP and ABP) showed a sensitivity >83(29)% and specificity >93(12)%. The coherence between signals was high (0.75–0.99). The three measurement situations did not significantly influence sensitivity, specificity or time shifts between the PPGr, PVP, ABP, and the reference CVP signal despite changes in physiological data between measurements.

Conclusion:  A respiratory synchronous variation in PPG and all invasive pressure signals was detected. The reflection mode PPGr signal seemed to be a constant phenomenon related to respiration regardless of whether or not the subject was awake, anaesthetized or ventilated, which increases its clinical usefulness in respiratory monitoring.

Keywords
general anaesthesia, monitoring, photoplethysmography, positive-pressure ventilation, respiration
National Category
Medical and Health Sciences
Identifiers
urn:nbn:se:liu:diva-31542 (URN)10.1111/j.1399-6576.2005.00721.x (DOI)17342 (Local ID)17342 (Archive number)17342 (OAI)
Available from: 2009-10-09 Created: 2009-10-09 Last updated: 2024-01-10Bibliographically approved
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