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Sharma, Sumit
Publications (10 of 11) Show all publications
Sharma, S., Hagbom, M., Svensson, L. & Nordgren, J. (2021). Human Norovirus and Sapovirus (2ed.). In: Dennis H. Bamford; Mark Zuckerman (Ed.), Encyclopedia of Virology: Fourth Edition (pp. 483-492). Academic Press
Open this publication in new window or tab >>Human Norovirus and Sapovirus
2021 (English)In: Encyclopedia of Virology: Fourth Edition / [ed] Dennis H. Bamford; Mark Zuckerman, Academic Press, 2021, 2, p. 483-492Chapter in book (Other academic)
Abstract [en]

The Caliciviridae family includes human norovirus and sapovirus. These are a diverse set of viruses causing acute gastroenteritis (AGE) in people of all ages, with norovirus being responsible for approximately 20% of all AGE worldwide and sapovirus 3%–17% of AGE in children, respectively. Susceptibility to norovirus is associated with human genetics, with approximately one-fifth of the population being resistant to the predominant GII.4 genotype. A human enteroid model has recently been successfully established to address questions regarding pathogenesis and virus–host interactions. While no specific antivirals are available, norovirus vaccine candidates are in clinical trials.

Place, publisher, year, edition, pages
Academic Press, 2021 Edition: 2
National Category
Infectious Medicine Microbiology in the medical area
Identifiers
urn:nbn:se:liu:diva-202392 (URN)10.1016/B978-0-12-809633-8.21543-4 (DOI)978-0-12-814516-6 (ISBN)
Available from: 2024-04-08 Created: 2024-04-08 Last updated: 2024-04-08
Sharma, S., Hagbom, M., Carlsson, B., Nederby Ohd, J., Insulander, M., Eriksson, R., . . . Nordgren, J. (2020). Secretor Status is Associated with Susceptibility to Disease in a Large GII.6 Norovirus Foodborne Outbreak. Food and Environmnetal Virology, 12, 28-34
Open this publication in new window or tab >>Secretor Status is Associated with Susceptibility to Disease in a Large GII.6 Norovirus Foodborne Outbreak
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2020 (English)In: Food and Environmnetal Virology, ISSN 1867-0334, E-ISSN 1867-0342, Vol. 12, p. 28-34Article in journal (Refereed) Published
Abstract [en]

Norovirus is commonly associated with food and waterborne outbreaks. Genetic susceptibility to norovirus is largely dependent on presence of histo-blood group antigens (HBGA), specifically ABO, secretor, and Lewis phenotypes. The aim of the study was to determine the association between HBGAs to norovirus susceptibility during a large norovirus foodborne outbreak linked to genotype GII.6 in an office-based company in Stockholm, Sweden, 2015. A two-episode outbreak with symptoms of diarrhea and vomiting occurred in 2015. An online questionnaire was sent to all 1109 employees that had worked during the first outbreak episode. Food and water samples were collected from in-house restaurant and tested for bacterial and viral pathogens. In addition, fecal samples were collected from 8 employees that had diarrhea. To investigate genetic susceptibility during the outbreak, 98 saliva samples were analyzed for ABO, secretor, and Lewis phenotypes using ELISA. A total of 542 of 1109 (49%) employees reported gastrointestinal symptoms. All 8 fecal samples tested positive for GII norovirus, which was also detected in coleslaw collected from the in-house restaurant. Eating at the in-house restaurant was significantly associated with risk of symptom development. Nucleotide sequencing was successful for 5/8 fecal samples and all belonged to the GII.6 genotype. HBGA characterization showed a strong secretor association to norovirus-related symptoms (P = 0.014). No association between norovirus disease and ABO phenotypes was observed. The result of this study shows that non-secretors were significantly less likely to report symptoms in a large foodborne outbreak linked to the emerging GII.6 norovirus strain.

Place, publisher, year, edition, pages
SPRINGER, 2020
Keywords
Norovirus; Outbreak; Host genetics; Histo-blood group antigens; GII; 6
National Category
Microbiology in the medical area
Identifiers
urn:nbn:se:liu:diva-162066 (URN)10.1007/s12560-019-09410-3 (DOI)000493266400001 ()31664650 (PubMedID)
Note

Funding Agencies|Linkoping University; Swedish Research CouncilSwedish Research Council [320301]; Swedish Foundation for Strategic ResearchSwedish Foundation for Strategic Research

Available from: 2019-11-19 Created: 2019-11-19 Last updated: 2024-01-08
Gunaydin, G., Nordgren, J., Sharma, S. & Hammarstrom, L. (2016). Association of elevated rotavirus-specific antibody titers with HBGA secretor status in Swedish individuals: The FUT2 gene as a putative susceptibility determinant for infection. Virus Research, 211, 64-68
Open this publication in new window or tab >>Association of elevated rotavirus-specific antibody titers with HBGA secretor status in Swedish individuals: The FUT2 gene as a putative susceptibility determinant for infection
2016 (English)In: Virus Research, ISSN 0168-1702, E-ISSN 1872-7492, Vol. 211, p. 64-68Article in journal (Refereed) Published
Abstract [en]

The histo-blood group antigens (HBGAs) have recently been suggested to serve as attachment factors for rotavirus VP8* (P-genotype) in vitro and associated with susceptibility in vivo. We thus investigated whether rotavirus antibody titers and genotype specific neutralization titers correlate with HBGA status in Swedish individuals. We investigated the effect of inactivating mutations in the secretor FUT2 (rs601338) and Lewis FUT3 genes (rs28362459, rs3894326, rs812936 and rs778986) on serum IgG antibody titers and neutralizing antibody titers to rotavirus strains of the P[8] and P[6] genotypes in Swedish healthy blood donors and patients with IgA deficiency using genotyping, enzyme linked immunosorbent assay and a neutralization assay. Rotavirus-specific serum IgG and neutralizing antibody titers to the Wa strain (G1P[8]), but not to the ST3 (G4P[6]) strain, were significantly higher in secretors (with at least one functional FUT2 gene) than in non-secretors (P<0.001) (with homozygous nonsense mutation in the FUT2 gene). Thus, our results represent that secretors show elevated rotavirus specific serum antibodies, suggesting a higher susceptibility to rotavirus infections, as compared to non-secretors in Sweden. (C) 2015 Elsevier B.V. All rights reserved.

Place, publisher, year, edition, pages
ELSEVIER SCIENCE BV, 2016
Keywords
Rotavirus; Histo-blood group antigen (HBGA); FUT2; Lewis; Secretor; Antibody response
National Category
Clinical Medicine
Identifiers
urn:nbn:se:liu:diva-124088 (URN)10.1016/j.virusres.2015.10.005 (DOI)000366443500009 ()26454189 (PubMedID)
Note

Funding Agencies|Swedish Research Council [K2012-56X-05975-32-3]

Available from: 2016-01-25 Created: 2016-01-19 Last updated: 2021-12-28
Nordgren, J., Sharma, S., Kambhampati, A., Lopman, B. & Svensson, L. (2016). Innate Resistance and Susceptibility to Norovirus Infection. PLoS Pathogens, 12(4), e1005385
Open this publication in new window or tab >>Innate Resistance and Susceptibility to Norovirus Infection
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2016 (English)In: PLoS Pathogens, ISSN 1553-7366, E-ISSN 1553-7374, Vol. 12, no 4, p. e1005385-Article in journal (Refereed) Published
Abstract [en]

n/a

Place, publisher, year, edition, pages
PUBLIC LIBRARY SCIENCE, 2016
National Category
Clinical Medicine
Identifiers
urn:nbn:se:liu:diva-130446 (URN)10.1371/journal.ppat.1005385 (DOI)000378156900003 ()27115484 (PubMedID)
Note

Funding Agencies|Swedish Foundation for Strategic Research

Available from: 2016-08-06 Created: 2016-08-05 Last updated: 2021-12-28
Sharma, S. & Nordgren, J. (2015). Editorial Material: Rotavirus vaccines in developing countries: issues and future considerations in FUTURE VIROLOGY, vol 10, issue 6, pp 663-666. FUTURE VIROLOGY, 10(6), 663-666
Open this publication in new window or tab >>Editorial Material: Rotavirus vaccines in developing countries: issues and future considerations in FUTURE VIROLOGY, vol 10, issue 6, pp 663-666
2015 (English)In: FUTURE VIROLOGY, ISSN 1746-0794, Vol. 10, no 6, p. 663-666Article in journal, Editorial material (Other academic) Published
Abstract [en]

n/a

Place, publisher, year, edition, pages
FUTURE MEDICINE LTD, 2015
Keywords
histo-blood group antigen; neonates; P[6]; rotavirus; vaccine efficacy
National Category
Clinical Medicine
Identifiers
urn:nbn:se:liu:diva-120296 (URN)10.2217/fvl.15.32 (DOI)000357132100002 ()
Available from: 2015-07-24 Created: 2015-07-24 Last updated: 2021-12-28
Istrate, C., Sharma, S., Nordgren, J., Videira e Castro, S., Lopes, A., Piedade, J., . . . Esteves, A. (2015). High rate of detection of G8P[6] rotavirus in children with acute gastroenteritis in So Tom, and Principe. Archives of Virology, 160(2), 423-428
Open this publication in new window or tab >>High rate of detection of G8P[6] rotavirus in children with acute gastroenteritis in So Tom, and Principe
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2015 (English)In: Archives of Virology, ISSN 0304-8608, E-ISSN 1432-8798, Vol. 160, no 2, p. 423-428Article in journal (Refereed) Published
Abstract [en]

The burden of rotavirus infections greatly affects the low-income African countries. In the absence of epidemiological data on pediatric diarrhea in So Tom, and Principe (STP), a study was conducted from August to December 2011. Rotavirus antigen was detected in 36.7 % of the collected fecal samples (87/237). G8P[6] was identified as the predominant genotype (71.1 % detection rate), while G1P[8] represented only 8.4 %. Phylogenetic analysis of VP7 G8 strains showed clustering within lineage G8d, while VP4 P[6] strains clustered within lineage 1a. Our results represent the first report on rotavirus from STP and show one of the highest detection rates of G8 rotaviruses worldwide.

Place, publisher, year, edition, pages
Springer Verlag (Germany), 2015
National Category
Clinical Medicine
Identifiers
urn:nbn:se:liu:diva-115324 (URN)10.1007/s00705-014-2244-7 (DOI)000349433500006 ()25283609 (PubMedID)
Note

Funding Agencies|Ministry of Health of STP; Calouste Gulbenkian Foundation (Lisbon, Portugal)

Available from: 2015-03-13 Created: 2015-03-13 Last updated: 2021-12-28
Nordgren, J., Sharma, S., Bucardo, F., Nasir, W., Gunaydin, G., Ouermi, D., . . . Svensson, L. (2014). Both Lewis and Secretor Status Mediate Susceptibility to Rotavirus Infections in a Rotavirus Genotype-Dependent Manner. Clinical Infectious Diseases, 59(11), 1567-1573
Open this publication in new window or tab >>Both Lewis and Secretor Status Mediate Susceptibility to Rotavirus Infections in a Rotavirus Genotype-Dependent Manner
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2014 (English)In: Clinical Infectious Diseases, ISSN 1058-4838, E-ISSN 1537-6591, Vol. 59, no 11, p. 1567-1573Article in journal (Refereed) Published
Abstract [en]

Background. The live oral rotavirus (RV) vaccines have shown a reduced efficacy in Africa. Recent in vitro studies have shown binding of the RV surface protein (VP4) to histo-blood group antigens (HBGAs) in an RV genotype-dependent manner, suggesting them to be putative receptors for RV. The diversity of HBGA phenotypes in different ethnic populations, combined with prevalence/absence of specific RV genotypes, led us to hypothesize whether the genetic variations in HBGAs in a population limit susceptibility to certain RV genotypes, plausibly leading to reduced vaccine efficacy. Methods. Association between HBGAs status and susceptibility to RV P genotypes was investigated in children in Burkina Faso and Nicaragua. In total, 242 children with diarrhea in Burkina Faso and Nicaragua were investigated, 93 of whom were RV positive. Results. In Burkina Faso, the P[8] RV strains (n = 27) infected only Lewis-and secretor-positive children (27/27; P less than .0001), but no Lewis-negative children. In contrast, the P[6] strains (n = 27) infected predominantly Lewis-negative children (n = 18; P less than.0001) but also Lewis-positive children, irrespective of their secretor status. The results from Nicaragua confirmed that all P[8]-infected children (n = 22) were secretor Lewis positive. Conclusions. As VP4 of genotype P[8] is a component of current RV vaccines, our finding that Lewis-negative children are resistant to P[8] strains provides a plausible explanation for the reduced vaccine efficacy in populations with a high percentage of Lewis-negative individuals, such as in Africa. Furthermore, our findings provide a plausible explanation as to why P[6] RV strains are more common in Africa.

Place, publisher, year, edition, pages
Oxford University Press (OUP): Policy A1 - Oxford Open Option C, 2014
Keywords
rotavirus; histo-blood group antigen; Lewis; susceptibility; vaccine
National Category
Clinical Medicine
Identifiers
urn:nbn:se:liu:diva-113179 (URN)10.1093/cid/ciu633 (DOI)000345841900011 ()25097083 (PubMedID)
Note

Funding Agencies|Swedish Research Council [8266, 3485, dnr-348-2011-7420]

Available from: 2015-01-13 Created: 2015-01-12 Last updated: 2021-12-28
Mansoori, N., Tripathi, M., Alam, R., Luthra, K., Sharma, S., Lakshmy, R., . . . Mukhopadhyay, A. K. (2014). Serum Folic Acid and RFC A80G Polymorphism in Alzheimers Disease and Vascular Dementia. American Journal of Alzheimer’s Disease and Other Dementia, 29(1), 38-44
Open this publication in new window or tab >>Serum Folic Acid and RFC A80G Polymorphism in Alzheimers Disease and Vascular Dementia
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2014 (English)In: American Journal of Alzheimer’s Disease and Other Dementia, ISSN 1533-3175, E-ISSN 1938-2731, Vol. 29, no 1, p. 38-44Article in journal (Refereed) Published
Abstract [en]

Low level of vitamin B12 and folic acid has been reported to play an important role in the pathogenesis of Alzheimer's disease (AD) and vascular dementia (VaD). Serum folic acid and vitamin B12 were assayed in 80 AD and 50 VaD cases and in 120 healthy controls. The reduced folate carrier (RFC1) gene, rs1051266, which encodes the RFC 1, protein was analyzed for polymorphism by polymerase chain reaction-restriction fragment length polymorphism. It was observed that the patients having folic acid <8.45 ng/mL had 2.4 (95% confidence interval [CI]: 1.4-4.5) times higher odds of having AD and 2.1 (95% CI: 1.1-4.2) times higher odds of having VaD than patients having folic acid ≥8.45 ng/mL. Serum vitamin B12 level did not show any such statistically significant effect in altering the odds. No direct association was found between variant (G) allele or genotype of rs1051266 with AD and VaD cases. On serum folate level no association was observed with gene polymorphism.

Place, publisher, year, edition, pages
SAGE Publications (UK and US), 2014
National Category
Medical and Health Sciences
Identifiers
urn:nbn:se:liu:diva-107465 (URN)10.1177/1533317513505131 (DOI)000331463000006 ()2-s2.0-84896735112 (Scopus ID)
Available from: 2014-06-12 Created: 2014-06-12 Last updated: 2017-12-05
Nordgren, J., Juste O Bonkoungou, I., Nitiema, L. W., Sharma, S., Ouermi, D., Simpore, J., . . . Svensson, L. (2012). Rotavirus in diarrheal children in rural Burkina Faso: High prevalence of genotype G6P[6]. Infection, Genetics and Evolution, 12(8), 1892-1898
Open this publication in new window or tab >>Rotavirus in diarrheal children in rural Burkina Faso: High prevalence of genotype G6P[6]
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2012 (English)In: Infection, Genetics and Evolution, ISSN 1567-1348, E-ISSN 1567-7257, Vol. 12, no 8, p. 1892-1898Article in journal (Refereed) Published
Abstract [en]

Group A rotavirus (RVA) is the most common cause of severe gastroenteritis in young children globally, and responsible for a significant number of deaths in African countries. While vaccines are available, trials have shown a lesser efficacy in Africa. One of the reasons could be the prevalence and/or emergence of unusual or novel RVA strains, as many strains detected in African countries remain uncharacterized. less thanbrgreater than less thanbrgreater thanIn this study, we characterized RVA positive specimens from two remote rural areas in Burkina Faso, West Africa. In total 56 RVA positive specimens were subgrouped by their VP6 gene, and G-and P typed by PCR and/or sequencing of the VP7 and VP4 genes, respectively. less thanbrgreater than less thanbrgreater thanNotably, we found a high prevalence of the unusual G6P[6]SGI strains (23%). It was the second most common constellation after G9P[8]SGII (32%); and followed by G1P[8]SGII (20%) and G2P[4]SGI (9%). We also detected a G8P[6]SGI strain, for the first time in Burkina Faso. The intra-genetic diversity was high for the VP4 gene with two subclusters within the P[8] genotype and three subclusters within the P[6] genotype which were each associated with a specific G-type, thereby suggesting a genetic linkage. The G6P[6]SGI and other SGI RVA strains infected younger children as compared to SGII strains (p andlt; 0.05). less thanbrgreater than less thanbrgreater thanTo conclude, in this study we observed the emergence of unusual RVA strains and high genetic diversity of RVA in remote rural areas of Burkina Faso. The results highlight the complexity of RVA epidemiology which may have implication for the introduction of rotavirus vaccines currently being evaluated in many African countries.

Place, publisher, year, edition, pages
Elsevier, 2012
Keywords
Rotavirus, Genotypes, G6P[6], Rural areas, Gastroenteritis, Children
National Category
Medical and Health Sciences
Identifiers
urn:nbn:se:liu:diva-87464 (URN)10.1016/j.meegid.2012.08.014 (DOI)000312429000038 ()
Note

Funding Agencies|Swedish Research Council|10392|

Available from: 2013-01-18 Created: 2013-01-18 Last updated: 2021-12-28Bibliographically approved
Hagbom, M., Sharma, S., Lundgren, O. & Svensson, L. (2012). Towards a human rotavirus disease model. CURRENT OPINION IN VIROLOGY, 2(4), 408-418
Open this publication in new window or tab >>Towards a human rotavirus disease model
2012 (English)In: CURRENT OPINION IN VIROLOGY, ISSN 1879-6257, Vol. 2, no 4, p. 408-418Article in journal (Refereed) Published
Abstract [en]

While the clinical importance of human rotavirus (RV) disease is well recognized and potent vaccines have been developed, our understanding of how human RV causes diarrhoea, vomiting and death remains unresolved. The fact that oral rehydration corrects electrolyte and water loss, indicates that enterocytes in the small intestine have a functional sodium-glucose co-transporter. Moreover, RV infection delays gastric emptying and loperamide appears to attenuate RV diarrhoea, thereby suggesting activation of the enteric nervous system. Serotonin (5-HT) receptor antagonists attenuate vomiting in young children with gastroenteritis while zinc and enkephalinase inhibitors attenuate RV-induced diarrhoea. In this review we discuss clinical symptoms, pathology, histology and treatment practices for human RV infections and compile the data into a simplified disease model.

Place, publisher, year, edition, pages
Elsevier, 2012
National Category
Medical and Health Sciences
Identifiers
urn:nbn:se:liu:diva-86900 (URN)10.1016/j.coviro.2012.05.006 (DOI)000312112900006 ()
Note

Funding Agencies|Swedish Research Council|A0320301|

Available from: 2013-01-07 Created: 2013-01-07 Last updated: 2024-01-08
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