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Cammenga, Jörg
Publications (10 of 11) Show all publications
Malinski, B., Vertemara, J., Faustini, E., Ladenvall, C., Norberg, A., Zhang, Y., . . . Lottersberger, F. (2023). Novel pathological variants of NHP2 affect N-terminal domain flexibility, protein stability, H/ACA Ribonucleoprotein (RNP) complex formation and telomerase activity. Human Molecular Genetics, 32(19), 2901-2912
Open this publication in new window or tab >>Novel pathological variants of NHP2 affect N-terminal domain flexibility, protein stability, H/ACA Ribonucleoprotein (RNP) complex formation and telomerase activity
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2023 (English)In: Human Molecular Genetics, ISSN 0964-6906, E-ISSN 1460-2083, Vol. 32, no 19, p. 2901-2912Article in journal (Refereed) Published
Abstract [en]

Telomere biology disorders (TBDs) are characterized by short telomeres, premature aging, bone marrow failure and cancer predisposition. Germline mutations in NHP2, encoding for one component of the telomerase cofactor H/ACA RNA binding complex together with Dyskerin, NOP10 and GAR1, have been previously reported in rare cases of TBDs. Here, we report two novel NHP2 variants (NHP2-A39T and NHP2-T44M) identified in a compound heterozygous patient affected by premature aging, bone marrow failure/myelodysplastic syndrome and gastric cancer. Although still able to support cell viability, both variants reduce the levels of hTR, the telomerase RNA component, and telomerase activity, expanding the panel of NHP2 pathological variants. Furthermore, both variants fail to be incorporated in the H/ACA RNA binding complex when in competition with wild-type endogenous NHP2, and the lack of incorporation causes their drastic proteasomal degradation. By RoseTTAFold prediction followed by molecular dynamics simulations, we reveal a dramatic distortion of residues 33-41, which normally position on top of the NHP2 core, as the main defect of NHP2-A39T, and high flexibility and the misplacement of the N-terminal region (residues 1-24) in NHP2-T44M and, to a lower degree, in NHP2-A39T. Because deletion of amino acids 2-24 causes a reduction in NHP2 levels only in the presence of wild-type NHP2, while deletion of amino acids 2-38 completely disrupts NHP2 stability, we propose that the two variants are mis-incorporated into the H/ACA binding complex due to the altered dynamics of the first 23 amino acids and/or the distortion of the residues 25-41 loop.

Place, publisher, year, edition, pages
OXFORD UNIV PRESS, 2023
National Category
Biochemistry Molecular Biology
Identifiers
urn:nbn:se:liu:diva-197569 (URN)10.1093/hmg/ddad114 (DOI)001051931400001 ()37440454 (PubMedID)
Note

Funding Agencies|SNPamp;SEQ Technology Platform in Uppsala; Swedish Research Council; Knut and Alice Wallenberg Foundation; Clinical Genomics Uppsala (SciLifeLab)

Available from: 2023-09-11 Created: 2023-09-11 Last updated: 2025-02-20Bibliographically approved
Lindholm, C., Olofsson, E., Creignou, M., Nilsson, L., Garelius, H. G., Cammenga, J., . . . Tobiasson, M. (2022). Failure to reach hematopoietic allogenic stem cell transplantation in patients with myelodysplastic syndromes planned for transplantation: a population-based study. Bone Marrow Transplantation, 57, 598-606
Open this publication in new window or tab >>Failure to reach hematopoietic allogenic stem cell transplantation in patients with myelodysplastic syndromes planned for transplantation: a population-based study
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2022 (English)In: Bone Marrow Transplantation, ISSN 0268-3369, E-ISSN 1476-5365, Vol. 57, p. 598-606Article in journal (Refereed) Published
Abstract [en]

The only potential cure for patients with myelodysplastic syndrome (MDS) is allogeneic hematopoietic stem cell transplantation (HCT). However, a proportion of patients who are HCT candidates do not finally get transplanted. This population-based study aimed to characterize HCT candidates were attempting to reach HCT fail and to identify causes and risk factors for failure. Data were collected from (1) the national Swedish registry, enrolling 291 transplant candidates between 2009-2018, and (2) Karolinska University Hospital, enrolling 131 transplantation candidates between 2000 and 2018. Twenty-five % (nation-wide) and 22% (Karolinska) failed to reach HCT. Reasons for failure to reach HCT were progressive and refractory disease (47%), no donor identified (22%), identification of comorbidity (18%), and infectious complications (14%). Factors associated with failure to reach HCT were IPSS-R cytogenetic risk-group very poor, mixed MDS/MPN disease, low blast count (0-4.9%), and low hemoglobin levels (<= 7.9 g/dL). Transplanted patients had a longer overall survival (OS) compared to patients who failed to reach transplantation (83 months versus 14 months; p < 0.001). The survival advantage was seen for the IPSS-R risk groups intermediate, high, and very high. This study demonstrated that a high proportion of HCT-candidates fail to reach HCT and underlines the difficulties associated with bridging MDS patients to HCT.

Place, publisher, year, edition, pages
Springer Nature, 2022
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-182915 (URN)10.1038/s41409-022-01582-0 (DOI)000749431500001 ()35105966 (PubMedID)
Note

Funding Agencies|Karolinska InstituteKarolinska Institutet

Available from: 2022-02-16 Created: 2022-02-16 Last updated: 2023-03-03Bibliographically approved
Engvall, M., Karlsson, Y., Kuchinskaya, E., Jörnegren, Å., Mathot, L., Pandzic, T., . . . Baliakas, P. (2022). Familial platelet disorder due to germline exonic deletions in RUNX1: a diagnostic challenge with distinct alterations of the transcript isoform equilibrium. Leukemia and Lymphoma, 63(10), 2311-2320
Open this publication in new window or tab >>Familial platelet disorder due to germline exonic deletions in RUNX1: a diagnostic challenge with distinct alterations of the transcript isoform equilibrium
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2022 (English)In: Leukemia and Lymphoma, ISSN 1042-8194, E-ISSN 1029-2403, Vol. 63, no 10, p. 2311-2320Article in journal (Refereed) Published
Abstract [en]

Germline pathogenic variants in RUNX1 are associated with familial platelet disorder with predisposition to myeloid malignancies (FPD/MM) with intragenic deletions in RUNX1 accounting for almost 7% of all reported variants. We present two new pedigrees with FPD/MM carrying two different germline RUNX1 intragenic deletions. The aforementioned deletions encompass exons 1-2 and 9-10 respectively, with the exon 9-10 deletion being previously unreported. RNA sequencing of patients carrying the exon 9-10 deletion revealed a fusion with LINC00160 resulting in a change in the 3 sequence of RUNX1. Expression analysis of the transcript isoform demonstrated altered RUNX1a/b/c ratios in carriers from both families compared to controls. Our data provide evidence on the impact of intragenic RUNX1 deletions on transcript isoform expression and highlight the importance of routinely performing copy number variant analysis in patients with suspected MM with germline predisposition.

Place, publisher, year, edition, pages
Taylor & Francis Ltd, 2022
Keywords
RUNX1 deletions; thrombocytopenia; FPD; MM; leukemia
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-185291 (URN)10.1080/10428194.2022.2067997 (DOI)000792741800001 ()35533071 (PubMedID)2-s2.0-85130118212 (Scopus ID)
Note

Funding Agencies|Lions Cancer Research Foundation, Uppsala

Available from: 2022-05-25 Created: 2022-05-25 Last updated: 2023-03-23Bibliographically approved
Czerw, T., Iacobelli, S., Malpassuti, V., Koster, L., Kroeger, N., Robin, M., . . . Yakoub-Agha, I. (2022). Impact of donor-derived CD34+infused cell dose on outcomes of patients undergoing allo-HCT following reduced intensity regimen for myelofibrosis: a study from the Chronic Malignancies Working Party of the EBMT. Bone Marrow Transplantation, 57, 261-270
Open this publication in new window or tab >>Impact of donor-derived CD34+infused cell dose on outcomes of patients undergoing allo-HCT following reduced intensity regimen for myelofibrosis: a study from the Chronic Malignancies Working Party of the EBMT
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2022 (English)In: Bone Marrow Transplantation, ISSN 0268-3369, E-ISSN 1476-5365, Vol. 57, p. 261-270Article in journal (Refereed) Published
Abstract [en]

The optimal CD34 + cell dose in the setting of RIC allo-HCT for myelofibrosis (MF) remains unknown. We retrospectively analyzed 657 patients with primary or secondary MF transplanted with use of peripheral blood (PB) stem cells after fludarabine/melphalan or fludarabine/busulfan RIC regimen. Median patient age was 58 (range, 22-76) years. Donors were HLA-identical sibling (MSD) or unrelated (UD). Median follow-up was 46 (2-194) months. Patients transplanted with higher doses of CD34 + cells (>7.0 x 10(6)/kg), had an increased chance of achievement of both neutrophil (hazard ratio (HR), 1.46; P < 0.001) and platelet engraftment (HR, 1.43; P < 0.001). In a model with interaction, for patients transplanted from a MSD, higher CD34 + dose was associated with improved overall survival (HR, 0.63; P = 0.04) and relapse-free survival (HR, 0.61; P = 0.02), lower risk of non-relapse mortality (HR, 0.57; P = 0.04) and higher rate of platelet engraftment. The combined effect of higher cell dose and UD was apparent only for higher neutrophil and platelet recovery rate. We did not document any detrimental effect of high CD34 + dose on transplant outcomes. More bulky splenomegaly was an adverse factor for survival, engraftment and NRM. Our analysis suggests a potential benefit for MF patients undergoing RIC PB-allo-HCT receiving more than 7.0 x 10(6)/kg CD34 + cells.

Place, publisher, year, edition, pages
SPRINGER NATURE, 2022
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-181768 (URN)10.1038/s41409-021-01540-2 (DOI)000724646100001 ()34853433 (PubMedID)
Available from: 2021-12-13 Created: 2021-12-13 Last updated: 2022-06-26
Hellström Lindberg, E., Cavelier, L., Cammenga, J., Andersson, P.-O., Fioretos, T. & Rosenquist, R. (2021). Precisionsmedicin standard vid flera hematologiska sjukdomar: Genpanelsekvensering viktig för diagnos och riktad behandling [Precision diagnostics and therapy in hematological malignancies]. Läkartidningen, 118
Open this publication in new window or tab >>Precisionsmedicin standard vid flera hematologiska sjukdomar: Genpanelsekvensering viktig för diagnos och riktad behandling [Precision diagnostics and therapy in hematological malignancies]
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2021 (Swedish)In: Läkartidningen, ISSN 0023-7205, E-ISSN 1652-7518, Vol. 118Article, review/survey (Refereed) Published
Abstract [en]

Precision diagnostics and therapy have been implemented rather early in clinical hematology due to the easy accessibility of blood and bone marrow, allowing not only for consecutive genetic analysis at diagnosis, remission and relapse, but also for culturing these cells and testing new drugs in vitro. One contributing factor has also been the relatively low number of »driver« mutations in hematologic malignancies and that some of them are gain of function mutations that are relatively easy to target by drugs. Examples of this development are ABL1-, JAK2-, and FLT3-inhibitors for the treatment of chronic myeloid leukemia, myeloproliferative neoplasms, and acute myeloid leukemia, respectively. More recently, gene panel sequencing has been introduced in clinical routine to identify genetic alterations with diagnostic, prognostic and predictive impact, and more sensitive techniques to monitor minimal residual disease are emerging. Whole genome and transcriptome sequencing are currently evaluated as the next diagnostic tool. Finally, a large number of targeted therapies are currently under development and/or undergoing clinical trials.

Abstract [sv]

Precisionsmedicin i form av specifik molekylär diagnostik och skräddarsydd behandling är sedan länge standard för flera hematologiska sjukdomar.

Vid mer komplexa hematologiska maligniteter är genpanelsekvensering i dag ett viktigt diagnostiskt verktyg och utgör grund för prognostisk bedömning och riktadbehandling.

Genpanelsekvensering kan även påvisa ärftlig predisposition för vissa hematologiska sjukdomar.

Precisionsverktyg för analys av minimal kvarvarande sjukdom efter behandling förbättrar uppföljningen.

Det finns ett stort antal precisionsläkemedel för hematologiska sjukdomar som är godkända eller befinner sigi klinisk prövning.

Place, publisher, year, edition, pages
Sveriges Läkarförbund, 2021
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-185095 (URN)33973223 (PubMedID)
Available from: 2022-05-17 Created: 2022-05-17 Last updated: 2022-05-17Bibliographically approved
Baliakas, P., Tesi, B., Wartiovaara-Kautto, U., Stray-Pedersen, A., Friis, L. S., Dybedal, I., . . . Andersen, M. K. (2019). Nordic Guidelines for Germline Predisposition to Myeloid Neoplasms in Adults: Recommendations for Genetic Diagnosis, Clinical Management and Follow-up. HemaSphere, 3(6), Article ID UNSP e321.
Open this publication in new window or tab >>Nordic Guidelines for Germline Predisposition to Myeloid Neoplasms in Adults: Recommendations for Genetic Diagnosis, Clinical Management and Follow-up
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2019 (English)In: HemaSphere, E-ISSN 2572-9241, Vol. 3, no 6, article id UNSP e321Article in journal (Refereed) Published
Abstract [en]

Myeloid neoplasms (MNs) with germline predisposition have recently been recognized as novel entities in the latest World Health Organization (WHO) classification for MNs. Individuals with MNs due to germline predisposition exhibit increased risk for the development of MNs, mainly acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS). Setting the diagnosis of MN with germline predisposition is of crucial clinical significance since it may tailor therapy, dictate the selection of donor for allogeneic hematopoietic stem cell transplantation (allo-HSCT), determine the conditioning regimen, enable relevant prophylactic measures and early intervention or contribute to avoid unnecessary or even harmful medication. Finally, it allows for genetic counseling and follow-up of at-risk family members. Identification of these patients in the clinical setting is challenging, as there is no consensus due to lack of evidence regarding the criteria defining the patients who should be tested for these conditions. In addition, even in cases with a strong suspicion of a MN with germline predisposition, no standard diagnostic algorithm is available. We present the first version of the Nordic recommendations for diagnostics, surveillance and management including considerations for allo-HSCT for patients and carriers of a germline mutation predisposing to the development of MNs.

Place, publisher, year, edition, pages
LIPPINCOTT WILLIAMS & WILKINS, 2019
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-163763 (URN)10.1097/HS9.0000000000000321 (DOI)000508564100020 ()31976490 (PubMedID)
Note

Funding Agencies|Nordic Cancer Union (NCU)

Available from: 2020-02-19 Created: 2020-02-19 Last updated: 2022-07-26
Eriksson, M., Peña-Martínez, P., Ramakrishnan, R., Chapellier, M., Högberg, C., Glowacki, G., . . . Järås, M. (2017). Agonistic targeting of TLR1/TLR2 induces p38 MAPK-dependent apoptosis and NF?B-dependent differentiation of AML cells. Blood Advances, 1(23), 2046-2057
Open this publication in new window or tab >>Agonistic targeting of TLR1/TLR2 induces p38 MAPK-dependent apoptosis and NF?B-dependent differentiation of AML cells
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2017 (English)In: Blood Advances, ISSN 2473-9529 , E-ISSN 2473-9537, Vol. 1, no 23, p. 2046-2057Article in journal (Refereed) Published
Abstract [en]

Acute myeloid leukemia (AML) is associated with poor survival, and there is a strong need to identify disease vulnerabilities that might reveal new treatment opportunities. Here, we found that Toll-like receptor 1 (TLR1) and TLR2 are upregulated on primary AML CD34+CD38-cells relative to corresponding normal bone marrow cells. Activating the TLR1/TLR2 complex by the agonist Pam3CSK4 inMLL-AF9-driven human AML resulted in induction of apoptosis by p38 MAPK-dependent activation of Caspase 3 and myeloid differentiation in a NF?B-dependent manner. By using murineTrp53 -/- MLL-AF9AML cells, we demonstrate that p53 is dispensable for Pam3CSK4-induced apoptosis and differentiation. Moreover, murineAML1-ETO9a-driven AML cells also were forced into apoptosis and differentiation on TLR1/TLR2 activation, demonstrating that the antileukemic effects observed were not confined toMLL-rearranged AML. We further evaluated whether Pam3CSK4 would exhibit selective antileukemic effects. Ex vivo Pam3CSK4 treatment inhibited murine and human leukemia-initiating cells, whereas murine normal hematopoietic stem and progenitor cells (HSPCs) were relatively less affected. Consistent with these findings, primary human AML cells across several genetic subtypes of AML were more vulnerable for TLR1/TLR2 activation relative to normal human HSPCs. In theMLL-AF9AML mouse model, treatment with Pam3CSK4 provided proof of concept for in vivo therapeutic efficacy. Our results demonstrate that TLR1 and TLR2 are upregulated on primitive AML cells and that agonistic targeting of TLR1/TLR2 forces AML cells into apoptosis by p38 MAPK-dependent activation of Caspase 3, and differentiation by activating NF?B, thus revealing a new putative strategy for therapeutically targeting AML cells.

Place, publisher, year, edition, pages
American Society of Hematology, 2017
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-146332 (URN)10.1182/bloodadvances.2017006148 (DOI)000413645600008 ()29296851 (PubMedID)
Available from: 2018-04-07 Created: 2018-04-07 Last updated: 2020-12-15
Baudet, A., Ek, F., Davidsson, J., Soneji, S., Olsson, R., Magnusson, M., . . . Juliusson, G. (2016). Small molecule screen identifies differentiation-promoting compounds targeting genetically diverse acute myeloid leukaemia [Letter to the editor]. British Journal of Haematology, 175(2), 342-346
Open this publication in new window or tab >>Small molecule screen identifies differentiation-promoting compounds targeting genetically diverse acute myeloid leukaemia
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2016 (English)In: British Journal of Haematology, ISSN 0007-1048, E-ISSN 1365-2141, Vol. 175, no 2, p. 342-346Article in journal, Letter (Other academic) Published
Place, publisher, year, edition, pages
John Wiley & Sons, 2016
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-126592 (URN)10.1111/bjh.13851 (DOI)000385763400020 ()26567888 (PubMedID)2-s2.0-84947739123 (Scopus ID)
Available from: 2016-03-30 Created: 2016-03-30 Last updated: 2018-03-19Bibliographically approved
Engert, A., Balduini, C., Brand, A., Coiffier, B., Cordonnier, C., Doehner, H., . . . Zieger, B. (2016). The European Hematology Association Roadmap for European Hematology Research: a consensus document. Haematologica, 101(2), 115-208
Open this publication in new window or tab >>The European Hematology Association Roadmap for European Hematology Research: a consensus document
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2016 (English)In: Haematologica, ISSN 0390-6078, E-ISSN 1592-8721, Vol. 101, no 2, p. 115-208Article in journal (Refereed) Published
Abstract [en]

The European Hematology Association (EHA) Roadmap for European Hematology Research highlights major achievements in diagnosis and treatment of blood disorders and identifies the greatest unmet clinical and scientific needs in those areas to enable better funded, more focused European hematology research. Initiated by the EHA, around 300 experts contributed to the consensus document, which will help European policy makers, research funders, research organizations, researchers, and patient groups make better informed decisions on hematology research. It also aims to raise public awareness of the burden of blood disorders on European society, which purely in economic terms is estimated at (sic)23 billion per year, a level of cost that is not matched in current European hematology research funding. In recent decades, hematology research has improved our fundamental understanding of the biology of blood disorders, and has improved diagnostics and treatments, sometimes in revolutionary ways. This progress highlights the potential of focused basic research programs such as this EHA Roadmap. The EHA Roadmap identifies nine sections in hematology: normal hematopoiesis, malignant lymphoid and myeloid diseases, anemias and related diseases, platelet disorders, blood coagulation and hemostatic disorders, transfusion medicine, infections in hematology, and hematopoietic stem cell transplantation. These sections span 60 smaller groups of diseases or disorders. The EHA Roadmap identifies priorities and needs across the field of hematology, including those to develop targeted therapies based on genomic profiling and chemical biology, to eradicate minimal residual malignant disease, and to develop cellular immunotherapies, combination treatments, gene therapies, hematopoietic stem cell treatments, and treatments that are better tolerated by elderly patients.

Place, publisher, year, edition, pages
Pavia, Italy: Fondazione Ferrata Storti, 2016
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-143791 (URN)10.3324/haematol.2015.136739 (DOI)000379156300012 ()26819058 (PubMedID)2-s2.0-84981361090 (Scopus ID)
Note

Funding Agencies|Cancer Research UK [12765]; Medical Research Council [MR/L022982/1, MC_UU_12009/8, MC_PC_12009, MC_U137981013]; British Heart Foundation [FS/09/039/27788]

Available from: 2017-12-18 Created: 2017-12-18 Last updated: 2018-01-09Bibliographically approved
Velasco-Hernandez, T., Tornero, D. & Cammenga, J. (2015). Loss of HIF-1 alpha accelerates murine FLT-3(ITD)-induced myeloproliferative neoplasia. Leukemia, 29(12), 2366-2374
Open this publication in new window or tab >>Loss of HIF-1 alpha accelerates murine FLT-3(ITD)-induced myeloproliferative neoplasia
2015 (English)In: Leukemia, ISSN 0887-6924, E-ISSN 1476-5551, Vol. 29, no 12, p. 2366-2374Article in journal (Refereed) Published
Abstract [en]

Hypoxia-induced signaling is important for normal and malignant hematopoiesis. The transcription factor hypoxia-inducible factor-1 alpha (HIF-1 alpha) has a crucial role in quiescence and self-renewal of hematopoietic stem cells (HSCs), as well as leukemia-initiating cells (LICs) of acute myeloid leukemia and chronic myeloid leukemia. We have investigated the effect of HIF-1 alpha loss on the phenotype and biology of FLT-3(ITD)-induced myeloproliferative neoplasm (MPN). Using transgenic mouse models, we show that deletion of HIF-1 alpha leads to an enhanced MPN phenotype reflected by an increased number of white blood cells, more severe splenomegaly and decreased survival. The proliferative effect of HIF-1 alpha loss is cell intrinsic as shown by transplantation into recipient mice. HSC loss and organ-specific changes in the number and percentage of long-term HSCs were the most pronounced effects on a cellular level after HIF-1 alpha deletion. Furthermore, we found a metabolic hyperactivation of malignant cells in the spleen upon loss of HIF-1 alpha. Some of our findings are in contrary to what has been previously described for the role of HIF-1 alpha in other myeloid hematologic malignancies and question the potential of HIF-1 alpha as a therapeutic target.

Place, publisher, year, edition, pages
NATURE PUBLISHING GROUP, 2015
National Category
Hematology
Identifiers
urn:nbn:se:liu:diva-123766 (URN)10.1038/leu.2015.156 (DOI)000366393900011 ()26104662 (PubMedID)
Note

Funding Agencies|Barncancerfonden; Cancerfonden; SSF through the Hemato-Linne and StemTherapy consortium (Sweden); Barncancerfonden (Sweden)

Available from: 2016-01-11 Created: 2016-01-11 Last updated: 2017-11-30
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