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Resin-acid derivatives bind to multiple sites on the voltage-sensor domain of the Shaker potassium channel
Linköpings universitet, Medicinska fakulteten. Linköpings universitet, Institutionen för biomedicinska och kliniska vetenskaper, Avdelningen för neurobiologi.ORCID-id: 0000-0002-8151-5430
KTH Royal Inst Technol, Sweden.
Linköpings universitet, Institutionen för biomedicinska och kliniska vetenskaper, Avdelningen för neurobiologi. Linköpings universitet, Medicinska fakulteten.
KTH Royal Inst Technol, Sweden.
Vise andre og tillknytning
2021 (engelsk)Inngår i: The Journal of General Physiology, ISSN 0022-1295, E-ISSN 1540-7748, Vol. 153, nr 4, artikkel-id e202012676Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Voltage-gated potassium (K-V) channels can be opened by negatively charged resin acids and their derivatives. These resin acids have been proposed to attract the positively charged voltage-sensor helix (S4) toward the extracellular side of the membrane by binding to a pocket located between the lipid-facing extracellular ends of the transmembrane segments S3 and S4. By contrast to this proposed mechanism, neutralization of the top gating charge of the Shaker KV channel increased resin-acid-induced opening, suggesting other mechanisms and sites of action. Here, we explore the binding of two resin-acid derivatives, Wu50 and Wu161, to the activated/open state of the Shaker KV channel by a combination of in silico docking, molecular dynamics simulations, and electrophysiology of mutated channels. We identified three potential resin-acid-binding sites around S4: (1) the S3/S4 site previously suggested, in which positively charged residues introduced at the top of S4 are critical to keep the compound bound, (2) a site in the cleft between S4 and the pore domain (S4/pore site), in which a tryptophan at the top of S6 and the top gating charge of S4 keeps the compound bound, and (3) a site located on the extracellular side of the voltage-sensor domain, in a cleft formed by S1-S4 (the top-VSD site). The multiple binding sites around S4 and the anticipated helical-screw motion of the helix during activation make the effect of resin-acid derivatives on channel function intricate. The propensity of a specific resin acid to activate and open a voltage-gated channel likely depends on its exact binding dynamics and the types of interactions it can form with the protein in a state-specific manner.

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ROCKEFELLER UNIV PRESS , 2021. Vol. 153, nr 4, artikkel-id e202012676
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URN: urn:nbn:se:liu:diva-174771DOI: 10.1085/jgp.202012676ISI: 000630187200001PubMedID: 33683319OAI: oai:DiVA.org:liu-174771DiVA, id: diva2:1541711
Merknad

Funding Agencies|Swedish Research CouncilSwedish Research CouncilEuropean Commission [20180404, 2018-04905]; Gustafsson Foundation, and Science for Life Laboratory; Swedish Brain Foundation [FO2019-0247]; Swedish Heart-Lung FoundationSwedish Heart-Lung Foundation [20180404]

Tilgjengelig fra: 2021-04-01 Laget: 2021-04-01 Sist oppdatert: 2024-03-22bibliografisk kontrollert

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