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Towards Clinical Deployment of Automated Anatomical Regions-Of-Interest
Linköpings universitet, Institutionen för teknik och naturvetenskap, Medie- och Informationsteknik. Linköpings universitet, Tekniska högskolan.
Linköpings universitet, Institutionen för teknik och naturvetenskap, Medie- och Informationsteknik. Linköpings universitet, Centrum för medicinsk bildvetenskap och visualisering, CMIV. Linköpings universitet, Tekniska högskolan.ORCID-id: 0000-0003-0908-9470
Linköpings universitet, Institutionen för teknik och naturvetenskap, Medie- och Informationsteknik. Linköpings universitet, Centrum för medicinsk bildvetenskap och visualisering, CMIV. Linköpings universitet, Tekniska högskolan.ORCID-id: 0000-0002-9466-9826
Linköpings universitet, Institutionen för medicinsk teknik. Linköpings universitet, Centrum för medicinsk bildvetenskap och visualisering, CMIV. Linköpings universitet, Tekniska högskolan.ORCID-id: 0000-0002-9091-4724
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2014 (Engelska)Ingår i: Eurographics Workshop on Visual Computing for Biology and Medicine / [ed] Ivan Viola and Katja Buehler and Timo Ropinski, Eurographics - European Association for Computer Graphics, 2014, s. 137-143Konferensbidrag, Publicerat paper (Refereegranskat)
Abstract [en]

The purpose of this work is to investigate, and improve, the feasibility of advanced Region Of Interest (ROI) selection schemes in clinical volume rendering. In particular, this work implements and evaluates an Automated Anatomical ROI (AA-ROI) approach based on the combination of automatic image registration (AIR) and Distance-Based Transfer Functions (DBTFs), designed for automatic selection of complex anatomical shapes without relying on prohibitive amounts of interaction. Domain knowledge and clinical experience has been included in the project through participation of practicing radiologists in all phases of the project. This has resulted in a set of requirements that are critical for Direct Volume Rendering applications to be utilized in clinical practice and a prototype AA-ROI implementation that was developed to addresses critical points in existing solutions. The feasibility of the developed approach was assessed through a study where five radiologists investigated three medical data sets with complex ROIs, using both traditional tools and the developed prototype software. Our analysis indicate that advanced, registration based ROI schemes could increase clinical efficiency in time-critical settings for cases with complex ROIs, but also that their clinical feasibility is conditional with respect to the radiologists trust in the registration process and its application to the data.

Ort, förlag, år, upplaga, sidor
Eurographics - European Association for Computer Graphics, 2014. s. 137-143
Serie
Eurographics Workshop on Visual Computing for Biology and Medicine, ISSN 2070-5778
Nationell ämneskategori
Data- och informationsvetenskap Datavetenskap (datalogi)
Identifikatorer
URN: urn:nbn:se:liu:diva-110233DOI: 10.2312/vcbm.20141199ISBN: 978-3-905674-62-0 (tryckt)OAI: oai:DiVA.org:liu-110233DiVA, id: diva2:743636
Konferens
VCBM 2014 : Eurographics Workshop on Visual Computing for Biology and Medicine, September 4-5, Vienna, Austira
Tillgänglig från: 2014-09-04 Skapad: 2014-09-04 Senast uppdaterad: 2018-01-11Bibliografiskt granskad
Ingår i avhandling
1. Medical Volume Visualization Beyond Single Voxel Values
Öppna denna publikation i ny flik eller fönster >>Medical Volume Visualization Beyond Single Voxel Values
2014 (Engelska)Doktorsavhandling, sammanläggning (Övrigt vetenskapligt)
Abstract [en]

Medical visualization involves many complex decisions for both the user and the imaging algorithms. This thesis aims to improve medical volume visualization through a series of technical contributions to aid such decision processes. Improvements are achieved by using more data, beyond single voxels, in the associated visual analyses.

Simultaneous visualization of multiple data sources and different data formats is rapidly becoming a necessity. This is due to both the growing number of data producing image acquisition techniques as well as the increase in geometric data representations that can be created. Maintaining high rendering performance under these circumstances is challenging, but necessary, to support an exploratory visualization process. This thesis proposes two algorithms to address this challenge: a multi-volume approach that applies binary-space partitioning to solve painters' algorithm geometrically and a rendering algorithm for hybrid data that improves the management of the available graphics memory.

Additional information for decision support is often derived from the captured image data. Classification techniques, in particular, often utilize secondary information sources or neighborhood analysis as means to improve specificity. One example is a proposed algorithm that improves visualization of blood vessels by automatically optimizing visualization parameters based on observed vesselness. This thesis also proposes algorithms involving neighborhood analysis, with a particular focus on domain specific classification knowledge provided by the user. One algorithm provides the ability to semantically state spatial relations between tissues based on encoded material information. Another algorithm improves the representation of discrete features by integrating the users' knowledge in the reconstruction step of the visualization pipeline.

Many of the methods proposed in this thesis can also be applied to other domains, but are all described here in the context of medical volume visualization as most of the research has been performed within this field.

Ort, förlag, år, upplaga, sidor
Linköping: Linköping University Electronic Press, 2014. s. 79
Serie
Linköping Studies in Science and Technology. Dissertations, ISSN 0345-7524 ; 1614
Nationell ämneskategori
Data- och informationsvetenskap Datavetenskap (datalogi) Medicinsk bildvetenskap
Identifikatorer
urn:nbn:se:liu:diva-110239 (URN)10.3384/diss.diva-110239 (DOI)978-91-7519-256-7 (ISBN)
Disputation
2014-10-03, Domteatern, Visualiseringscenter C, Kungsgatan 54, Norrköping, 09:00 (Engelska)
Opponent
Handledare
Tillgänglig från: 2014-09-04 Skapad: 2014-09-04 Senast uppdaterad: 2025-02-09Bibliografiskt granskad

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Lindholm, StefanForsberg, DanielYnnerman, AndersKnutsson, HansAndersson, MatsLundström, Claes

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Lindholm, StefanForsberg, DanielYnnerman, AndersKnutsson, HansAndersson, MatsLundström, Claes
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Medie- och InformationsteknikTekniska högskolanCentrum för medicinsk bildvetenskap och visualisering, CMIVInstitutionen för medicinsk teknik
Data- och informationsvetenskapDatavetenskap (datalogi)

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