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On the sampling strategies and models for measuring diffusion exchange with a double diffusion encoding sequence
Linköping University, Faculty of Science & Engineering. Linköping University, Department of Biomedical Engineering, Division of Biomedical Engineering.ORCID iD: 0000-0002-0287-2166
Linköping University, Department of Health, Medicine and Caring Sciences, Division of Diagnostics and Specialist Medicine. Linköping University, Faculty of Medicine and Health Sciences. Linköping University, Center for Medical Image Science and Visualization (CMIV). Region Östergötland, Center for Diagnostics, Medical radiation physics.ORCID iD: 0000-0002-5713-6385
Linköping University, Department of Health, Medicine and Caring Sciences, Division of Diagnostics and Specialist Medicine. Linköping University, Faculty of Medicine and Health Sciences. Region Östergötland, Center for Diagnostics, Medical radiation physics. Linköping University, Center for Medical Image Science and Visualization (CMIV).ORCID iD: 0000-0001-8661-2232
Zhejiang University, China.
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2023 (English)In: Magnetic Resonance Letters, ISSN 2772-5162, Vol. 3, p. 232-247Article in journal (Refereed) Published
Abstract [en]

Water exchange between the different compartments of a heterogeneous specimen can be characterized via diffusion magnetic resonance imaging (dMRI). Many analysis frameworks using dMRI data have been proposed to describe exchange, often using a double diffusion encoding (DDE) stimulated echo sequence. Techniques such as diffusion exchange weighted imaging (DEWI) and the filter exchange and rapid exchange models, use a specific subset of the full space DDE signal. In this work, a general representation of the DDE signal was employed with different sampling schemes (namely constant �1, diagonal and anti-diagonal) from the data reduction models to estimate exchange. A near-uniform sampling scheme was proposed and compared with the other sampling schemes. The filter exchange and rapid exchange models were also applied to estimate exchange with their own subsampling schemes. These subsampling schemes and models were compared on both simulated data and experimental data acquired with a benchtop MR scanner. In synthetic data, the diagonal and near-uniform sampling schemes performed the best due to the consistency of their estimates with the ground truth. In experimental data, the shifted diagonal and near-uniform sampling schemes outperformed the others, yielding the most consistent estimates with the full space estimation. The results suggest the feasibility of measuring exchange using a general representation of the DDE signal along with variable sampling schemes. In future studies, algorithms could be further developed for the optimization of sampling schemes, as well as incorporating additional properties, such as geometry and diffusion anisotropy, into exchange frameworks.

Place, publisher, year, edition, pages
KeAi Publishing Communications , 2023. Vol. 3, p. 232-247
Keywords [en]
Diffusion MRI; Water exchange; Sampling schemes; Double diffusion encoding
National Category
Medical Engineering
Identifiers
URN: urn:nbn:se:liu:diva-198024DOI: 10.1016/j.mrl.2023.05.003ISI: 001222151400001OAI: oai:DiVA.org:liu-198024DiVA, id: diva2:1799426
Funder
The Swedish Foundation for International Cooperation in Research and Higher Education (STINT)Swedish Research Council
Note

Funding agencies:This research was funded by the Swedish Foundation for International Cooperation in Research and Higher Education (STINT), and the Swedish Research Council (Dnr 2022–04715).

Available from: 2023-09-22 Created: 2023-09-22 Last updated: 2024-05-31Bibliographically approved

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Ordinola, AlfredoCai, ShanLundberg, PeterÖzarslan, Evren

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