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Transient interdomain interactions in free USP14 shape its conformational ensemble
Linköping University, Department of Physics, Chemistry and Biology, Chemistry. Linköping University, Faculty of Science & Engineering.ORCID iD: 0000-0003-4810-3669
Linköping University, Department of Physics, Chemistry and Biology, Bioinformatics. Linköping University, Faculty of Science & Engineering.ORCID iD: 0000-0002-3772-8279
Linköping University, Department of Biomedical and Clinical Sciences, Division of Clinical Chemistry and Pharmacology. Linköping University, Faculty of Medicine and Health Sciences.ORCID iD: 0000-0002-4148-2160
Linköping University, Department of Biomedical and Clinical Sciences, Division of Clinical Chemistry and Pharmacology. Linköping University, Faculty of Medicine and Health Sciences.ORCID iD: 0000-0001-6671-7600
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2024 (English)In: Protein Science, ISSN 0961-8368, E-ISSN 1469-896X, Vol. 33, no 5, article id e4975Article in journal (Refereed) Published
Abstract [en]

The deubiquitinase (DUB) ubiquitin-specific protease 14 (USP14) is a dual domain protein that plays a regulatory role in proteasomal degradation and has been identified as a promising therapeutic target. USP14 comprises a conserved USP domain and a ubiquitin-like (Ubl) domain separated by a 25-residue linker. The enzyme activity of USP14 is autoinhibited in solution, but is enhanced when bound to the proteasome, where the Ubl and USP domains of USP14 bind to the Rpn1 and Rpt1/Rpt2 units, respectively. No structure of full-length USP14 in the absence of proteasome has yet been presented, however, earlier work has described how transient interactions between Ubl and USP domains in USP4 and USP7 regulate DUB activity. To better understand the roles of the Ubl and USP domains in USP14, we studied the Ubl domain alone and in full-length USP14 by nuclear magnetic resonance spectroscopy and used small angle x-ray scattering and molecular modeling to visualize the entire USP14 protein ensemble. Jointly, our results show how transient interdomain interactions between the Ubl and USP domains of USP14 predispose its conformational ensemble for proteasome binding, which may have functional implications for proteasome regulation and may be exploited in the design of future USP14 inhibitors.

Place, publisher, year, edition, pages
WILEY , 2024. Vol. 33, no 5, article id e4975
Keywords [en]
DUB; molecular modeling; NMR; protein dynamics; SAXS
National Category
Structural Biology
Identifiers
URN: urn:nbn:se:liu:diva-202471DOI: 10.1002/pro.4975ISI: 001198303400001PubMedID: 38588275OAI: oai:DiVA.org:liu-202471DiVA, id: diva2:1851579
Note

Funding Agencies|Swedish Research Council [2020-03352, 233158Pj01H]; Swedish Cancer Foundation [211479Pj01H, PR2022-0107]; Swedish Childhood Cancer Foundation; LiU Cancer research network; [2018-04392]

Available from: 2024-04-15 Created: 2024-04-15 Last updated: 2025-03-14

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Salomonsson, JohannesWallner, BjörnSjöstrand, LindaD´arcy, PadraigSunnerhagen, MariaAhlner, Alexandra

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