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Optimising Neutron Reflectometry Experiments through Sensitivity-Guided Data Analysis and Substrate Engineering
Linköping University, Department of Physics, Chemistry and Biology, Thin Film Physics. Linköping University, Faculty of Science & Engineering.ORCID iD: 0000-0003-2425-0453
2025 (English)Licentiate thesis, comprehensive summary (Other academic)
Abstract [en]

Neutron reflectometry (NR) is a technique used for probing the structure of buried interfaces and is particularly useful for studying the structure of surfaces and thin films within condensed matter systems. In the context of soft condensed matter lipid bilayers deposited on the surface of a solid substrate, are heavily investigated as they can be designed to mimic different kinds of biological membranes. NR can be used to obtain structural properties such as thickness, solvent penetration or roughness of the adsorbed layers at interfaces. Moreover, by fitting the neutron reflectivity data to a model of neutron scattering length density (SLD) it is possible to determine the chemical composition of the films. In addition, due to the neutron’s magnetic moment, it is possible to obtain the magnetic properties of a material by using polarised neutron beams and analysing the magnetic SLD depth profile.

When fitting model parameters to experimental NR data, it is often challenging to decouple material related parameters, such as real and imaginary parts of the SLD, and structural parameters like layer thicknesses and interface roughness. In optical (photonic) analysis, many methods have been developed to solve such correlation problems. One approach is referred to as multiple sample analysis (MSA), where two or more similar samples, but with some parameters varied, are measured. In the subsequent analysis, two or more corresponding models are fitted simultaneously to the measurements. In NR there is an analogous standard technique of contrast variation, where the problem to decouple parameters is even more challenging since only intensities are measured with the loss of phase information – often termed the "phase problem". Furthermore, an additional possibility to find unique solutions of the SLD from reflectivity data is to use switchable magnetic reference layers (MRL). In the layered thin film structure, a MRL is deposited, whose characteristics can be controlled and, therefore, known beforehand. By applying an external magnetic field this layer is magnetised in a specific direction and probed with neutrons of different spin states. The MRL thus provides additional measurement data and a possibility to decouple the model parameters.

Since NR experiments are both extremely expensive to run, as well as difficult to access, it is important to make the best possible use of the experimental time. Reducing measurement time while maintaining high precision is key to expanding the applicability of neutron scattering techniques. To improve the effectiveness in extracting useful information from neutron reflectivity experiments we have designed substrate assemblies comprising a Si slab, a switchable MRL, and an inert top layer, specifically for modelling and characterisation of thin coatings with unknown properties with lipid bilayers or polymers being prime examples. An optimised substrate stack yields significantly different SLD profiles for polarised neutrons upon opposite magnetisations, effectively increasing the available data for obtaining the SLD profile for the unknown coating. The substrate assemblies are designed using the Holistic Optimization for Gaining Better Evidence from Neutrons HOGBEN software employing a sensitivity analysis based on Fisher information FI and correlation matrices, enabling systematic evaluation of the information gain for different configurations. The importance of this research lies in the potential to address the problem with limited beamtime access at neutron facilities by reducing the total measurement time required per sample without compromising obtained data quality.

The present study aims at optimising the design of solid substrates for polarised neutron reflectometry (PNR) experiments at the solid/liquid interface for the structural investigation of soft matter/biology samples. The substrate assembly in this work consisted of a Si single crystal with its native oxide, a ferromagnetic Fe reference layer, and a SiO2 capping layer. By exploiting the magnetic contrast provided by the Fe layer and performing measurements in different ambients (H2O, D2O, and SMW), we obtained several reflectivity datasets from a single sample. The measurements, carried out with the POLREF instrument at the ISIS Neutron and Muon Source, STFC Rutherford Appleton Laboratory, UK provided detailed information on the SLD profile of a head-tail-head bilayer lipid structure. Building on these results, we initiated sensitivity studies using parameter correlation and FI to find the optimal substrate assembly designs that minimise measurement time while preserving data quality. Our results demonstrate that sensitivity is significantly improved by jointly optimising the thicknesses of the Fe and the capping layer. In particular, we find that well-chosen configurations of the MRL and capping layers can yield equivalent experimental information with up to a fivefold reduction in measurement time. 

Place, publisher, year, edition, pages
Linköping: Linköping University Electronic Press, 2025. , p. 45
Series
Linköping Studies in Science and Technology. Licentiate Thesis, ISSN 0280-7971 ; 2021
Keywords [en]
Polarised neutron reflectometry, Scattering length density, Magnetic reference layer, Lipid bilayers, Fisher information, Sensitivity analysis, Experiment optimisation
National Category
Condensed Matter Physics
Identifiers
URN: urn:nbn:se:liu:diva-218117DOI: 10.3384/9789181182989ISBN: 9789181182972 (print)ISBN: 9789181182989 (electronic)OAI: oai:DiVA.org:liu-218117DiVA, id: diva2:2001924
Presentation
2025-10-20, Planck (J206), F Building, Campus Valla, Linköping, 09:15 (English)
Opponent
Supervisors
Note

Funding agencies: The Swedish Foundation for Strategic Research (UU/SSF GSn15-0008) within the Swedish national graduate schoolin neutron scattering (SwedNess) and the Swedish government’s Strategic Research Area "Advanced Functional Materials" (AFM, SFO-Mat-LiU 2009-00971) at the Department of Physics, Chemistry, and Biology, at Linköping University, Sweden. Experiments were conducted on the POLREF beamlineat ISIS Neutron and Muon Source, UK.

Available from: 2025-09-29 Created: 2025-09-29 Last updated: 2025-09-29Bibliographically approved
List of papers
1. Structure and interfacial properties of phospholipid-containing sponge nanoparticles and their interaction with myoglobin
Open this publication in new window or tab >>Structure and interfacial properties of phospholipid-containing sponge nanoparticles and their interaction with myoglobin
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2025 (English)In: Journal of Colloid and Interface Science, ISSN 0021-9797, E-ISSN 1095-7103, Vol. 697, article id 137879Article in journal (Refereed) Published
Abstract [en]

Hypothesis: Sponge phase (L3) lipid nanoparticles (L3-NPs) have been shown to have large potential for the encapsulation of biomolecules, such as enzymes, with applications in food and pharmaceutical science. In this study, we introduce new formulations of L3-NPs including the phospholipids dioleoylphosphatidylcholine (DOPC) and dioleoyltrimethylammonium propane (DOTAP). The interaction of these new L3-NPs with myoglobin is of interest for the development of iron supplements which can be incorporated during food processing. Experiments: We characterized the sample structure by small-angle X-ray scattering (SAXS) measurements with and without the addition of myoglobin. We also tested the myoglobin-lipid interaction in an experimental setup that mimicked the interface between the bilayer and water channels within the bicontinuous sponge structure. This included spreading the L3-NPs onto a hydrophilic surface to form supported lipid bilayers and characterizing their interaction with myoglobin by means of quartz crystal microbalance with dissipation monitoring and polarized neutron reflectometry. Findings: SAXS data indicate that the new formulations containing DOPC and DOTAP formed a sponge phase in the bulk. The data from the surface techniques showed that deposited bilayers containing DOPC were largely unaffected by the addition of myoglobin, whereas those without DOPC were destabilized and partially removed.

Place, publisher, year, edition, pages
ACADEMIC PRESS INC ELSEVIER SCIENCE, 2025
Keywords
Sponge-phase nanoparticles, Supported lipid bilayers, Polarised neutron reflectometry
National Category
Physical Chemistry
Identifiers
urn:nbn:se:liu:diva-214426 (URN)10.1016/j.jcis.2025.137879 (DOI)001500368000001 ()40424802 (PubMedID)2-s2.0-105005874346 (Scopus ID)
Note

Funding Agencies|ISIS neutron source [CRG-2965]

Available from: 2025-06-09 Created: 2025-06-09 Last updated: 2025-09-29

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Yakymenko, Ivan

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