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Silicon based affinity biochips viewed with imaging ellipsometry
Linköping University, Department of Physics, Chemistry and Biology, Biotechnology . Linköping University, The Institute of Technology.
School of Chemical and Physical Sciences, Victoria University, Wellington, New Zealand.
Linköping University, Department of Physics, Chemistry and Biology, Biomolecular and Organic Electronics . Linköping University, The Institute of Technology.ORCID iD: 0000-0002-2071-7768
Linköping University, Department of Physics, Chemistry and Biology, Biotechnology . Linköping University, The Institute of Technology.ORCID iD: 0000-0001-9711-794X
2000 (English)In: Measurement science and technology, ISSN 0957-0233, E-ISSN 1361-6501, Vol. 11, no 6, p. 801-Article in journal (Refereed) Published
Abstract [en]

In this paper we report on the fabrication of an affinity biochip with a matrix of 900 targets for detection with imaging ellipsometry. Two methods of fabrication of chips are shown: one based on wet etching of a silicon surface and the other on the preparation of so-called tension wells on the silicon surface. The dispensing of reagents and ligands was performed using a pipetting robot equipped with a micro-capillary, a syringe pump and micro-stepping motors. Measurements were performed on the chips in real time with carbohydrate model substances selected for six common lectins. Affinity binding was shown for three of the tested model substances.

Place, publisher, year, edition, pages
2000. Vol. 11, no 6, p. 801-
Keywords [en]
affinity biochip, imaging ellipsometry, silicon
National Category
Engineering and Technology
Identifiers
URN: urn:nbn:se:liu:diva-60385DOI: 10.1088/0957-0233/11/6/325OAI: oai:DiVA.org:liu-60385DiVA, id: diva2:356527
Available from: 2010-10-12 Created: 2010-10-12 Last updated: 2022-06-08
In thesis
1. Affinity biosensors with porous and multi-array surfaces
Open this publication in new window or tab >>Affinity biosensors with porous and multi-array surfaces
1999 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Affinity biosensing is one of many analytical techniques that have high potential for the detection of drug leads. In this thesis the use of ellipsometry, surface plasmon resonance (SPR) as well as quartz crystal microbalance (QCM) as screening methods in drug discovery are presented. In particularly, attention was given to the sensing surfaces and their incorporation in multi-sensor arrays, or biochips, for monitoring the specific affinity binding of low molecular weight molecules.

Silicon dioxide and gold surfaces were rendered porous and used as the biosensing surface. Porous surfaces enhanced the performance of the biosensor considerably, due to the increase in the capacity of binding ligands. In the case of porous silicon dioxide the increase in the response is 10-fold, while porous gold showed a 6-fold increase, when employing ellipsometric measurements. It was also shown that porous gold can successfully be incorporated in SPR systems when used as a biosensor, resulting in a small increase in sensitivity when employing rough gold surface and an 20-fold increase in case of thick porous gold layers, compared to planar surfaces. The surface area of the gold electrode on the crystals was increased by rendering the electrodes porous. This increased the response up to a factor 3. Thus, porous surfaces together with ellipsometry, SPR or QCM have the advantage of not requiring labelling, such as fluorescence, isotope or antigen tags, for achieving the necessary sensitivity.

Further, ellipsometric and SPR imaging systems were introduced employing a 1 cm2 surface, containing 900 targets. These biochips are a step towards a faster highthroughput screening process. Two methods of fabrication of these biochips are shown: one based on wet etching of a silicon surface and the other on the preparation of so called tension wells on the silicon surface.

Affinity models were used throughout this work.Streptavidin was immobilised to the porous silicon to bind biotin and an oligopeptide, synthesised by means of combinatorial chemistry monitored with the ellipsometer. A protein model system consisting of anti-human myoglobin as analyte and sheep skeletal myoglobin as ligand was used in different concentrations. Measurements on the biochips were performed with carbohydrate model substances selected for six common lectins.

Place, publisher, year, edition, pages
Linköping: Linköping University, 1999. p. 30
Series
Linköping Studies in Science and Technology. Dissertations, ISSN 0345-7524 ; 609
National Category
Analytical Chemistry
Identifiers
urn:nbn:se:liu:diva-185134 (URN)9172196181 (ISBN)
Public defence
1999-11-30, Planck, Fysikhuset, Linköpings universitet, Linköping, 10:15
Opponent
Note

All or some of the partial works included in the dissertation are not registered in DIVA and therefore not linked in this post.

Available from: 2022-06-08 Created: 2022-06-08 Last updated: 2022-06-08Bibliographically approved

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Jager, EdwinMandenius, Carl-Fredrik

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