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Validation of a screening method for the detection of colistin-resistant E. coli containing mcr-1 in feral swine feces
USDA, CO 80526 USA.
USDA, CO 80526 USA.
USDA, CO 80526 USA.
USDA, CO 80526 USA.
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2020 (English)In: Journal of Microbiological Methods, ISSN 0167-7012, E-ISSN 1872-8359, Vol. 172, article id 105892Article in journal (Refereed) Published
Abstract [en]

A method was developed and validated for the detection of colistin-resistant Escherichia coli containing mcr-1 in the feces of feral swine. Following optimization of an enrichment method using EC broth supplemented with colistin (1 mu g/mL) and vancomycin (8 mu g/mL), aliquots derived from 100 feral swine fecal samples were spiked with of one of five different mcr-1 positive E. coli strains (between 10(0) and 10(4) CFU/g), for a total of 1110 samples tested. Enrichments were then screened using a simple boil-prep and a previously developed real-time PCR assay for mcr-1 detection. The sensitivity of the method was determined in swine feces, with mcr-1 E. coli inocula of 0.1-9.99 CFU/g (n = 340), 10-49.99 CFU/g (n = 170), 50-99 CFU/g (n = 255), 100-149 CFU/g (n = 60), and 200-2200 CFU/g (n = 175), which were detected with 32%, 72%, 88%, 95%, and 98% accuracy, respectively. Uninoculated controls (n = 100) were negative for mcr-1 following enrichment.

Place, publisher, year, edition, pages
ELSEVIER , 2020. Vol. 172, article id 105892
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Microbiology in the medical area
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URN: urn:nbn:se:liu:diva-165647DOI: 10.1016/j.mimet.2020.105892ISI: 000528192100025PubMedID: 32184162OAI: oai:DiVA.org:liu-165647DiVA, id: diva2:1429527
Note

Funding Agencies|U.S. Department of Agriculture, APHISUnited States Department of Agriculture (USDA)

Available from: 2020-05-11 Created: 2020-05-11 Last updated: 2020-05-11

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